GO:0044804
JSON
nucleophagy
Biological Process
Definition (GO:0044804 GONUTS page)
A form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded. PMID:24013549
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
late nucleophagy | narrow |
nucleus degradation | related |
autophagy of nucleus | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0044804
Child Term | Relationship to GO:0044804 |
---|---|
piecemeal microautophagy of the nucleus
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0044804 | nucleophagy | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5Y5Z0 | 10116 | A0A8I5Y5Z0_RAT | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6AAM8 | 10116 | A0A8I6AAM8_RAT | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6I6T2 | 10116 | A6I6T2_RAT | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | D4A9M7 | 10116 | D4A9M7_RAT | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q6KAU8 | 10090 | A16L2_MOUSE | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:22082872 | |
NOT-qualified manual | protein | Q7KJ42 | 7227 | Q7KJ42_DROME | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092 | |
NOT-qualified manual | protein | Q7KM33 | 7227 | Q7KM33_DROME | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092 | |
NOT-qualified manual | protein | Q8NAA4 | 9606 | A16L2_HUMAN | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q95U83 | 7227 | Q95U83_DROME | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092 | |
NOT-qualified manual | protein | Q9V9C8 | 7227 | Q9V9C8_DROME | GO:0006914 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092 |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0044805 | obsolete late nucleophagy | replaced_by GO:0044804 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0044804 based on ALL annotations
The top 100 of 361 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nucleophagy
|
34,557.49 | 100.00 | 5,641 | 5,641 |
Atg8-family ligase activity
|
12,467.89 | 32.52 | 4,328 | 11,996 |
glycophagy
|
10,171.51 | 28.06 | 4,838 | 16,437 |
ubiquitin-like protein transferase activity
|
8,334.74 | 22.59 | 4,405 | 18,264 |
autophagy of mitochondrion
|
2,966.76 | 8.52 | 5,185 | 60,396 |
phagophore assembly site
|
2,266.94 | 6.50 | 4,986 | 76,007 |
rDNA chromatin condensation
|
17,354.86 | 5.72 | 342 | 681 |
autophagosome assembly
|
1,560.45 | 4.48 | 4,874 | 107,939 |
cytoplasm to vacuole targeting by the Cvt pathway
|
7,439.09 | 4.23 | 282 | 1,310 |
protein localization to phagophore assembly site
|
1,605.87 | 3.37 | 614 | 13,213 |
Totals | 56524 | 3771377 |
No co-occurrence statistics for GO:0044804 based on MANUAL annotations
The top 100 of 218 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nucleophagy
|
2,282.33 | 100.00 | 566 | 566 |
glycophagy
|
1,563.71 | 66.67 | 544 | 794 |
phosphatidylinositol-3,5-bisphosphate binding
|
1,263.49 | 43.33 | 377 | 681 |
protein localization to phagophore assembly site
|
1,217.24 | 42.57 | 384 | 720 |
autophagy of mitochondrion
|
927.60 | 38.77 | 506 | 1,245 |
phagophore assembly site membrane
|
1,002.13 | 36.24 | 382 | 870 |
phosphatidylinositol-3-phosphate binding
|
752.15 | 28.31 | 378 | 1,147 |
Atg8-family conjugating enzyme activity
|
2,225.27 | 20.56 | 117 | 120 |
phagophore assembly site
|
257.96 | 9.33 | 197 | 1,743 |
ubiquitin-like protein transferase activity
|
1,542.12 | 8.47 | 50 | 74 |
Totals | 4587 | 125099 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2023-10-10 | Added | SYNONYM | late nucleophagy |
2023-10-10 | Added | RELATION | is a GO:0016236 (macroautophagy) |
2023-10-10 | Deleted | RELATION | is a GO:0006914 (autophagy) |
2023-06-13 | Deleted | SYNONYM | nucleophagy |
2023-06-13 | Deleted | SYNONYM | nucleus degradation |
2023-06-13 | Added | SYNONYM | nucleus degradation |
2023-06-13 | Added | SYNONYM | autophagy of nucleus |
2023-06-13 | Updated | TERM | nucleophagy |
2017-08-04 | Added | SYNONYM | nucleophagy |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-06-13 | Updated | TERM | nucleophagy |
2017-07-12 | Updated | TERM | autophagy of nucleus |
2013-09-12 | Added | TERM | nucleophagy |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-10-10 | Added | SYNONYM | late nucleophagy |
2023-06-13 | Deleted | SYNONYM | nucleophagy |
2023-06-13 | Deleted | SYNONYM | nucleus degradation |
2023-06-13 | Added | SYNONYM | nucleus degradation |
2023-06-13 | Added | SYNONYM | autophagy of nucleus |
2017-08-04 | Added | SYNONYM | nucleophagy |
2017-07-28 | Added | DEFINITION | A form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded. |
2017-07-28 | Deleted | DEFINITION | A selective form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded. |
2013-09-12 | Added | SYNONYM | nucleus degradation |
2013-09-12 | Added | DEFINITION | A selective form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-10-10 | Added | RELATION | is a GO:0016236 (macroautophagy) |
2023-10-10 | Deleted | RELATION | is a GO:0006914 (autophagy) |
2013-09-12 | Added | RELATION | is a GO:0006914 (autophagy) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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