This term is obsolete.

GO:0044804 JSON

nucleophagy

Biological Process

Definition (GO:0044804 GONUTS page)

A form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded. PMID:24013549

71,539 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
late nucleophagy narrow
autophagy of nucleus exact
nucleus degradation related

Ancestor Chart

Ancestor chart for GO:0044804
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0044804

Child Term Relationship to
GO:0044804
piecemeal microautophagy of the nucleus
is_a

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0044804 nucleophagy Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I5Y5Z0 10116 A0A8I5Y5Z0_RAT GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AAM8 10116 A0A8I6AAM8_RAT GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6I6T2 10116 A6I6T2_RAT GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D4A9M7 10116 D4A9M7_RAT GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q6KAU8 10090 A16L2_MOUSE GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:22082872
NOT-qualified manual protein Q7KJ42 7227 Q7KJ42_DROME GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092
NOT-qualified manual protein Q7KM33 7227 Q7KM33_DROME GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092
NOT-qualified manual protein Q8NAA4 9606 A16L2_HUMAN GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q95U83 7227 Q95U83_DROME GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092
NOT-qualified manual protein Q9V9C8 7227 Q9V9C8_DROME GO:0006914 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19088092

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0044805 obsolete late nucleophagy replaced_by GO:0044804

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0044804 based on ALL annotations
The top 100 of 350 co-occurring terms
Co-occurring Term PR S% #Together #Compared
nucleophagy
33,895.80 100.00 5,846 5,846
Atg8-family ligase activity
12,258.50 32.61 4,491 12,418
ubiquitin-like protein transferase activity
11,306.01 30.53 4,576 13,719
glycophagy
10,031.34 28.27 5,045 17,047
autophagy of mitochondrion
2,939.37 8.61 5,387 62,121
phagophore assembly site
2,153.48 6.30 5,162 81,250
rDNA chromatin condensation
17,022.56 5.53 342 681
pexophagy
4,354.86 5.21 471 3,666
autophagosome assembly
1,535.57 4.50 5,060 111,693
cytoplasm to vacuole targeting by the Cvt pathway
7,873.65 4.16 282 1,214
Totals 59088 3818639
No co-occurrence statistics for GO:0044804 based on MANUAL annotations
The top 100 of 215 co-occurring terms
Co-occurring Term PR S% #Together #Compared
nucleophagy
2,302.66 100.00 613 613
glycophagy
1,573.13 66.78 593 868
autophagy of mitochondrion
1,152.38 47.33 550 1,099
phosphatidylinositol-3,5-bisphosphate binding
1,319.47 44.78 412 719
protein localization to phagophore assembly site
1,230.63 42.84 419 784
phagophore assembly site membrane
1,004.40 36.20 417 956
pexophagy
989.93 35.63 414 963
phosphatidylinositol-3-phosphate binding
780.79 29.13 413 1,218
Atg8-family conjugating enzyme activity
2,266.69 20.49 126 128
protein-macromolecule adaptor activity
327.60 13.32 414 2,910
Totals 5785 134158

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2023-10-10 Added RELATION is a GO:0016236 (macroautophagy)
2023-10-10 Added SYNONYM late nucleophagy
2023-10-10 Deleted RELATION is a GO:0006914 (autophagy)
2023-06-13 Updated TERM nucleophagy
2023-06-13 Deleted SYNONYM nucleus degradation
2023-06-13 Added SYNONYM autophagy of nucleus
2023-06-13 Added SYNONYM nucleus degradation
2023-06-13 Deleted SYNONYM nucleophagy
2017-08-04 Added SYNONYM nucleophagy
Timestamp Action Category Detail
2023-06-13 Updated TERM nucleophagy
2017-07-12 Updated TERM autophagy of nucleus
2013-09-12 Added TERM nucleophagy
Timestamp Action Category Detail
2023-10-10 Added SYNONYM late nucleophagy
2023-06-13 Deleted SYNONYM nucleus degradation
2023-06-13 Added SYNONYM autophagy of nucleus
2023-06-13 Added SYNONYM nucleus degradation
2023-06-13 Deleted SYNONYM nucleophagy
2017-08-04 Added SYNONYM nucleophagy
2017-07-28 Added DEFINITION A form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded.
2017-07-28 Deleted DEFINITION A selective form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded.
2013-09-12 Added DEFINITION A selective form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded.
2013-09-12 Added SYNONYM nucleus degradation
Timestamp Action Category Detail
2023-10-10 Added RELATION is a GO:0016236 (macroautophagy)
2023-10-10 Deleted RELATION is a GO:0006914 (autophagy)
2013-09-12 Added RELATION is a GO:0006914 (autophagy)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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