GO:0046947
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hydroxylysine biosynthetic process
Biological Process
Definition (GO:0046947 GONUTS page)
The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
hydroxylysine anabolism | exact |
hydroxylysine formation | exact |
hydroxylysine synthesis | exact |
hydroxylysine biosynthesis | exact |
Ancestor Chart
Ancestor chart for GO:0046947
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_output | CHEBI | CHEBI:133574 | 5-hydroxylysinium |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0046947 based on ALL annotations
The top 40 of 40 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
hydroxylysine biosynthetic process
|
1,133,365.00 | 100.00 | 172 | 172 |
epidermis morphogenesis
|
133,444.60 | 10.15 | 73 | 620 |
procollagen glucosyltransferase activity
|
99,651.09 | 7.89 | 75 | 853 |
endothelial cell morphogenesis
|
82,735.64 | 6.64 | 73 | 1,000 |
procollagen-lysine 5-dioxygenase activity
|
39,872.94 | 3.52 | 172 | 4,889 |
lung morphogenesis
|
41,617.53 | 3.50 | 73 | 1,988 |
peptidyl-lysine hydroxylation
|
314,823.62 | 2.70 | 5 | 18 |
procollagen galactosyltransferase activity
|
24,587.12 | 2.11 | 73 | 3,365 |
collagen metabolic process
|
17,708.83 | 1.53 | 73 | 4,672 |
neural tube development
|
16,547.13 | 1.43 | 73 | 5,000 |
Totals | 3100 | 97637763 |
No co-occurrence statistics for GO:0046947 based on MANUAL annotations
The top 29 of 29 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
hydroxylysine biosynthetic process
|
322,949.75 | 100.00 | 4 | 4 |
procollagen glucosyltransferase activity
|
56,165.18 | 17.39 | 4 | 23 |
peptidyl-lysine hydroxylation
|
53,824.96 | 15.79 | 3 | 18 |
procollagen-lysine 5-dioxygenase activity
|
19,572.71 | 6.06 | 4 | 66 |
procollagen galactosyltransferase activity
|
9,097.18 | 2.74 | 2 | 71 |
epidermis morphogenesis
|
7,510.46 | 2.27 | 2 | 86 |
endothelial cell morphogenesis
|
7,257.30 | 2.20 | 2 | 89 |
lung morphogenesis
|
6,459.00 | 1.96 | 2 | 100 |
collagen metabolic process
|
6,151.42 | 1.87 | 2 | 105 |
basement membrane assembly
|
4,548.59 | 1.39 | 2 | 142 |
Totals | 70 | 118535 |
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2023-12-26 | Added | RELATION | is a GO:0170043 (non-proteinogenic amino acid biosynthetic process) |
2021-05-28 | Deleted | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2020-11-03 | Added | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2016-11-28 | Added | RELATION | is a GO:0042398 (modified amino acid biosynthetic process) |
2016-11-28 | Deleted | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2016-06-22 | Deleted | RELATION | is a GO:0042398 (modified amino acid biosynthetic process) |
2016-06-22 | Added | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2013-06-20 | Deleted | RELATION | is a GO:1901607 (alpha-amino acid biosynthetic process) |
2013-03-11 | Added | RELATION | is a GO:1901607 (alpha-amino acid biosynthetic process) |
2012-11-02 | Added | RELATION | is a GO:0042398 (modified amino acid biosynthetic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-01-15 | Updated | TERM | hydroxylysine biosynthetic process |
2003-06-10 | Added | TERM | hydroxylysine biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. |
2007-08-09 | Added | SYNONYM | hydroxylysine biosynthesis |
2007-08-09 | Added | SYNONYM | hydroxylysine synthesis |
2007-08-09 | Added | SYNONYM | hydroxylysine formation |
2007-08-09 | Added | SYNONYM | hydroxylysine anabolism |
2007-08-09 | Deleted | SYNONYM | hydroxylysine biosynthesis |
2007-08-09 | Deleted | SYNONYM | hydroxylysine synthesis |
2007-08-09 | Deleted | SYNONYM | hydroxylysine formation |
2007-08-09 | Deleted | SYNONYM | hydroxylysine anabolism |
2007-01-15 | Added | SYNONYM | hydroxylysine biosynthesis |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. |
2005-08-10 | Added | SYNONYM | hydroxylysine formation |
2005-08-10 | Added | SYNONYM | hydroxylysine anabolism |
2005-08-10 | Added | SYNONYM | hydroxylysine synthesis |
2003-07-01 | Added | DEFINITION | The formation from simpler components of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-12-26 | Added | RELATION | is a GO:0170043 (non-proteinogenic amino acid biosynthetic process) |
2021-05-28 | Deleted | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2020-11-03 | Added | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2016-11-28 | Added | RELATION | is a GO:0042398 (modified amino acid biosynthetic process) |
2016-11-28 | Deleted | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2016-06-22 | Deleted | RELATION | is a GO:0042398 (modified amino acid biosynthetic process) |
2016-06-22 | Added | RELATION | is a GO:0008652 (amino acid biosynthetic process) |
2013-06-20 | Deleted | RELATION | is a GO:1901607 (alpha-amino acid biosynthetic process) |
2013-03-11 | Added | RELATION | is a GO:1901607 (alpha-amino acid biosynthetic process) |
2012-11-02 | Added | RELATION | is a GO:0042398 (modified amino acid biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0009067 (aspartate family amino acid biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0046946 (hydroxylysine metabolic process) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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