This term is obsolete.

GO:0046947 JSON

hydroxylysine biosynthetic process

Biological Process

Definition (GO:0046947 GONUTS page)

The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.

172 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
hydroxylysine anabolism exact
hydroxylysine formation exact
hydroxylysine synthesis exact
hydroxylysine biosynthesis exact

Ancestor Chart

Ancestor chart for GO:0046947
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Ancestor chart

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_output CHEBI CHEBI:133574 5-hydroxylysinium

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0046947 based on ALL annotations
The top 40 of 40 co-occurring terms
Co-occurring Term PR S% #Together #Compared
hydroxylysine biosynthetic process
1,133,365.00 100.00 172 172
epidermis morphogenesis
133,444.60 10.15 73 620
procollagen glucosyltransferase activity
99,651.09 7.89 75 853
endothelial cell morphogenesis
82,735.64 6.64 73 1,000
procollagen-lysine 5-dioxygenase activity
39,872.94 3.52 172 4,889
lung morphogenesis
41,617.53 3.50 73 1,988
peptidyl-lysine hydroxylation
314,823.62 2.70 5 18
procollagen galactosyltransferase activity
24,587.12 2.11 73 3,365
collagen metabolic process
17,708.83 1.53 73 4,672
neural tube development
16,547.13 1.43 73 5,000
Totals 3100 97637763
No co-occurrence statistics for GO:0046947 based on MANUAL annotations
The top 29 of 29 co-occurring terms
Co-occurring Term PR S% #Together #Compared
hydroxylysine biosynthetic process
322,949.75 100.00 4 4
procollagen glucosyltransferase activity
56,165.18 17.39 4 23
peptidyl-lysine hydroxylation
53,824.96 15.79 3 18
procollagen-lysine 5-dioxygenase activity
19,572.71 6.06 4 66
procollagen galactosyltransferase activity
9,097.18 2.74 2 71
epidermis morphogenesis
7,510.46 2.27 2 86
endothelial cell morphogenesis
7,257.30 2.20 2 89
lung morphogenesis
6,459.00 1.96 2 100
collagen metabolic process
6,151.42 1.87 2 105
basement membrane assembly
4,548.59 1.39 2 142
Totals 70 118535

Change Log

Timestamp Action Category Detail
2023-12-26 Added RELATION is a GO:0170043 (non-proteinogenic amino acid biosynthetic process)
2021-05-28 Deleted RELATION is a GO:0008652 (amino acid biosynthetic process)
2020-11-03 Added RELATION is a GO:0008652 (amino acid biosynthetic process)
2016-11-28 Added RELATION is a GO:0042398 (modified amino acid biosynthetic process)
2016-11-28 Deleted RELATION is a GO:0008652 (amino acid biosynthetic process)
2016-06-22 Deleted RELATION is a GO:0042398 (modified amino acid biosynthetic process)
2016-06-22 Added RELATION is a GO:0008652 (amino acid biosynthetic process)
2013-06-20 Deleted RELATION is a GO:1901607 (alpha-amino acid biosynthetic process)
2013-03-11 Added RELATION is a GO:1901607 (alpha-amino acid biosynthetic process)
2012-11-02 Added RELATION is a GO:0042398 (modified amino acid biosynthetic process)
Timestamp Action Category Detail
2007-01-15 Updated TERM hydroxylysine biosynthetic process
2003-06-10 Added TERM hydroxylysine biosynthesis
Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
2007-08-09 Added SYNONYM hydroxylysine biosynthesis
2007-08-09 Added SYNONYM hydroxylysine synthesis
2007-08-09 Added SYNONYM hydroxylysine formation
2007-08-09 Added SYNONYM hydroxylysine anabolism
2007-08-09 Deleted SYNONYM hydroxylysine biosynthesis
2007-08-09 Deleted SYNONYM hydroxylysine synthesis
2007-08-09 Deleted SYNONYM hydroxylysine formation
2007-08-09 Deleted SYNONYM hydroxylysine anabolism
2007-01-15 Added SYNONYM hydroxylysine biosynthesis
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
2005-08-10 Added SYNONYM hydroxylysine formation
2005-08-10 Added SYNONYM hydroxylysine anabolism
2005-08-10 Added SYNONYM hydroxylysine synthesis
2003-07-01 Added DEFINITION The formation from simpler components of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
Timestamp Action Category Detail
2023-12-26 Added RELATION is a GO:0170043 (non-proteinogenic amino acid biosynthetic process)
2021-05-28 Deleted RELATION is a GO:0008652 (amino acid biosynthetic process)
2020-11-03 Added RELATION is a GO:0008652 (amino acid biosynthetic process)
2016-11-28 Added RELATION is a GO:0042398 (modified amino acid biosynthetic process)
2016-11-28 Deleted RELATION is a GO:0008652 (amino acid biosynthetic process)
2016-06-22 Deleted RELATION is a GO:0042398 (modified amino acid biosynthetic process)
2016-06-22 Added RELATION is a GO:0008652 (amino acid biosynthetic process)
2013-06-20 Deleted RELATION is a GO:1901607 (alpha-amino acid biosynthetic process)
2013-03-11 Added RELATION is a GO:1901607 (alpha-amino acid biosynthetic process)
2012-11-02 Added RELATION is a GO:0042398 (modified amino acid biosynthetic process)
2008-04-01 Updated RELATION is a GO:0009067 (aspartate family amino acid biosynthetic process)
2008-04-01 Updated RELATION is a GO:0046946 (hydroxylysine metabolic process)
Timestamp Action Category Detail
Timestamp Action Category Detail
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