GO:0048874
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host-mediated regulation of intestinal microbiota composition
Biological Process
Definition (GO:0048874 GONUTS page)
The biological process involved in maintaining the steady-state number of cells within a population of free-living cells such as the bacteria in the gut. PMID:25757720
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
host-induced regulation of intestinal microbiota composition | related |
homeostasis of number of cells in a free-living population | related |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0048874 | host-mediated regulation of intestinal microbiota composition | Never in Taxon | 2 | Bacteria | |
GO:0048874 | host-mediated regulation of intestinal microbiota composition | Never in Taxon | 2157 | Archaea | |
GO:0048874 | host-mediated regulation of intestinal microbiota composition | Never in Taxon | 4895 | Schizosaccharomyces | |
GO:0048874 | host-mediated regulation of intestinal microbiota composition | Never in Taxon | 4932 | Saccharomyces cerevisiae |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q63035 | 10116 | NLRP6_RAT | GO:0048874 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q91WS2 | 10090 | NLRP6_MOUSE | GO:0048874 | 2 NOT-qualified manual annotations exist with evidence code ECO:0000315 from these references: PMID:28801232, PMID:29281815 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0048874 based on ALL annotations
The top 100 of 364 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
host-mediated regulation of intestinal microbiota composition
|
276,117.25 | 100.00 | 706 | 706 |
response to peptidoglycan
|
76,752.88 | 14.21 | 159 | 572 |
interferon-mediated signaling pathway
|
276,117.25 | 12.89 | 91 | 91 |
maintenance of protein complex location
|
234,828.67 | 12.60 | 91 | 107 |
anatomical structure homeostasis
|
178,203.33 | 12.04 | 91 | 141 |
multiple spine synapse organization, single dendrite
|
276,117.25 | 11.61 | 82 | 82 |
negative regulation of microglial cell mediated cytotoxicity
|
276,117.25 | 11.61 | 82 | 82 |
response to type III interferon
|
141,958.60 | 11.49 | 91 | 177 |
antifungal innate immune response
|
48,776.04 | 11.47 | 174 | 985 |
regulation of interleukin-2 production
|
155,758.45 | 11.37 | 88 | 156 |
Totals | 9280 | 101109 |
No co-occurrence statistics for GO:0048874 based on MANUAL annotations
The top 100 of 337 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
host-mediated regulation of intestinal microbiota composition
|
28,706.64 | 100.00 | 45 | 45 |
muramyl dipeptide binding
|
25,835.98 | 19.57 | 9 | 10 |
detection of muramyl dipeptide
|
28,706.65 | 13.33 | 6 | 6 |
nucleotide-binding oligomerization domain containing 2 signaling pathway
|
5,871.81 | 11.25 | 9 | 44 |
temperature homeostasis
|
4,275.46 | 11.20 | 14 | 94 |
negative regulation of microglial cell mediated cytotoxicity
|
28,706.65 | 11.11 | 5 | 5 |
interferon-mediated signaling pathway
|
28,706.65 | 11.11 | 5 | 5 |
extrinsic component of plasma membrane
|
5,741.33 | 11.11 | 9 | 45 |
regulation of appetite
|
5,616.52 | 10.98 | 9 | 46 |
nucleotide transport
|
23,922.21 | 10.87 | 5 | 6 |
Totals | 519 | 4458 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4932 (Saccharomyces cerevisiae) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:2157 (Archaea) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:2 (Bacteria) |
2018-05-31 | Updated | TERM | host-mediated regulation of intestinal microbiota composition |
2018-05-31 | Added | SYNONYM | host-induced regulation of intestinal microbiota composition |
2018-05-31 | Added | SYNONYM | homeostasis of number of cells in a free-living population |
2018-05-31 | Added | RELATION | is a GO:0051851 (modulation by host of symbiont process) |
2018-05-31 | Deleted | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2012-12-15 | Added | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-05-31 | Updated | TERM | host-mediated regulation of intestinal microbiota composition |
2007-01-15 | Added | TERM | homeostasis of number of cells in a free-living population |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-05-31 | Added | SYNONYM | host-induced regulation of intestinal microbiota composition |
2018-05-31 | Added | SYNONYM | homeostasis of number of cells in a free-living population |
2010-12-01 | Deleted | DEFINITION | The biological process involved in maintaining the steady-state of cell number within a population of free-living cells such as the bacteria in the gut. |
2010-12-01 | Added | DEFINITION | The biological process involved in maintaining the steady-state number of cells within a population of free-living cells such as the bacteria in the gut. |
2010-03-13 | Deleted | DEFINITION | The biological process involved in maintaining the equilibrium of cell number within a population of free-living cells such as the bacteria in the gut. |
2010-03-13 | Added | DEFINITION | The biological process involved in maintaining the steady-state of cell number within a population of free-living cells such as the bacteria in the gut. |
2008-05-13 | Added | DEFINITION | The biological process involved in maintaining the equilibrium of cell number within a population of free-living cells such as the bacteria in the gut. |
2008-05-12 | Deleted | DEFINITION | The biological process involved in maintaining the equilibrium of cell number within a population of free-living cells such as the bacteria in the gut. |
2007-04-20 | Updated | DEFINITION | The biological process involved in maintaining the equilibrium of cell number within a population of free-living cells such as the bacteria in the gut. |
2007-01-15 | Added | DEFINITION | The biological process involved in maintaining the equilibrium of cell number within a population of free-living cells suc as the bacteria in the gut. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-05-31 | Added | RELATION | is a GO:0051851 (modulation by host of symbiont process) |
2018-05-31 | Deleted | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2012-12-15 | Added | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2012-12-15 | Deleted | RELATION | is a GO:0051704 (obsolete multi-organism process) |
2008-08-11 | Added | RELATION | is a GO:0051704 (obsolete multi-organism process) |
2008-04-01 | Updated | RELATION | is a GO:0048872 (homeostasis of number of cells) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4932 (Saccharomyces cerevisiae) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:2157 (Archaea) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:2 (Bacteria) |
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