GO:0050692
JSON
DNA binding domain binding
Molecular Function
Definition (GO:0050692 GONUTS page)
Binding to a protein's DNA binding domain (DBD). PMID:9682036
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
DBD binding | exact |
Ancestor Chart
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5ZRB2 | 10116 | A0A8I5ZRB2_RAT | GO:0050692 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6ATU9 | 10116 | A0A8I6ATU9_RAT | GO:0050692 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6GHJ9 | 10116 | A0A8I6GHJ9_RAT | GO:0050692 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | B5DFB6 | 10116 | B5DFB6_RAT | GO:0050692 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F1M049 | 10116 | F1M049_RAT | GO:0050692 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O70305 | 10090 | ATX2_MOUSE | GO:0050692 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9668173 | |
NOT-qualified manual | protein | P21333-1 | 9606 | FLNA_HUMAN | GO:0005515 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684 | |
NOT-qualified manual | protein | P63026 | 9913 | VAMP2_BOVIN | GO:0005515 | 2 NOT-qualified manual annotations exist with evidence code ECO:0000353 from this reference: PMID:20702699 | |
NOT-qualified manual | protein | Q86V48 | 9606 | LUZP1_HUMAN | GO:0005515 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0050692 based on ALL annotations
The top 100 of 313 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
DNA binding domain binding
|
965,043.44 | 100.00 | 202 | 202 |
branching involved in pancreas morphogenesis
|
965,043.50 | 47.52 | 96 | 96 |
positive regulation of forebrain neuron differentiation
|
965,043.50 | 47.52 | 96 | 96 |
hepatocyte cell migration
|
965,043.50 | 47.52 | 96 | 96 |
positive regulation of cell cycle checkpoint
|
955,094.56 | 47.29 | 96 | 97 |
LBD domain binding
|
357,287.10 | 36.47 | 194 | 524 |
positive regulation of heart growth
|
472,674.34 | 31.79 | 96 | 196 |
lymphatic endothelial cell fate commitment
|
384,538.44 | 28.97 | 104 | 261 |
positive regulation of thyroid hormone receptor signaling pathway
|
437,751.66 | 28.57 | 88 | 194 |
negative regulation of bile acid biosynthetic process
|
371,720.47 | 28.26 | 104 | 270 |
Totals | 6723 | 388127 |
No co-occurrence statistics for GO:0050692 based on MANUAL annotations
The top 100 of 303 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
DNA binding domain binding
|
80,737.44 | 100.00 | 16 | 16 |
positive regulation of forebrain neuron differentiation
|
64,589.95 | 23.53 | 4 | 5 |
LBD domain binding
|
23,922.20 | 22.86 | 8 | 27 |
branching involved in pancreas morphogenesis
|
60,553.08 | 17.65 | 3 | 4 |
hepatocyte cell migration
|
60,553.08 | 17.65 | 3 | 4 |
lymphatic endothelial cell fate commitment
|
29,359.07 | 17.39 | 4 | 11 |
positive regulation of cell cycle checkpoint
|
48,442.47 | 16.67 | 3 | 5 |
lens placode formation involved in camera-type eye formation
|
24,842.29 | 16.00 | 4 | 13 |
negative regulation of bile acid biosynthetic process
|
24,842.29 | 16.00 | 4 | 13 |
ventricular cardiac myofibril assembly
|
16,147.49 | 12.50 | 4 | 20 |
Totals | 269 | 4437 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. |
2021-05-24 | Added | DEFINITION | Binding to a protein's DNA binding domain (DBD). |
2019-11-01 | Deleted | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2019-11-01 | Added | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. |
2019-11-01 | Added | SYNONYM | DBD binding |
2019-11-01 | Updated | TERM | DNA binding domain binding |
2019-11-01 | Deleted | SYNONYM | DNA binding domain binding |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2008-05-13 | Added | DEFINITION | Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-11-01 | Updated | TERM | DNA binding domain binding |
2003-10-11 | Added | TERM | DBD domain binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. |
2021-05-24 | Added | DEFINITION | Binding to a protein's DNA binding domain (DBD). |
2019-11-01 | Deleted | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2019-11-01 | Added | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. |
2019-11-01 | Added | SYNONYM | DBD binding |
2019-11-01 | Deleted | SYNONYM | DNA binding domain binding |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2008-05-13 | Added | DEFINITION | Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2008-05-12 | Deleted | DEFINITION | Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
2007-08-09 | Added | SYNONYM | DNA binding domain binding |
2007-08-09 | Deleted | SYNONYM | DNA binding domain binding |
2004-04-19 | Added | SYNONYM | DNA binding domain binding |
2004-04-16 | Deleted | SYNONYM | DNA binding domain binding |
2003-10-11 | Added | SYNONYM | DNA binding domain binding |
2003-10-11 | Added | DEFINITION | Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0019904 (protein domain specific binding) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link