This term is obsolete.

GO:0051498 JSON

syn-copalyl diphosphate synthase activity

Molecular Function

Definition (GO:0051498 GONUTS page)

Catalysis of the reaction: geranylgeranyl diphosphate = 9alpha-copalyl diphosphate.

7 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
diterpene cyclase activity broad

Ancestor Chart

Ancestor chart for GO:0051498
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Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating to catalytic activities using the IPI evidence code Link
Describing enzyme functions that catalyse multi-stage reactions Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P02521 9031 ARLY1_CHICK GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q10102 284812 YAQ1_SCHPO GO:0016872 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:36739946
NOT-qualified manual protein Q7KGG1 7227 Q7KGG1_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370
NOT-qualified manual protein Q7SIE0 9103 ARLY1_MELGA GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q8MZ84 7227 Q8MZ84_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370

Cross-references

Database ID Description
EC 5.5.1.14
MetaCyc RXN-8528
RHEA 25524

Cross-Ontology Relations

Relation Other Ontology ID Term
has_participant CHEBI CHEBI:58756 2-trans,6-trans,10-trans-geranylgeranyl diphosphate(3-)
has_participant CHEBI CHEBI:58622 5alpha,9beta,10alpha-labda-8(20),13-dien-15-yl diphosphate(3-)

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0051498 based on ALL annotations
The top 16 of 16 co-occurring terms
Co-occurring Term PR S% #Together #Compared
syn-copalyl diphosphate synthase activity
38,987,756.00 100.00 5 5
aphidicolan-16 beta-ol synthase activity
38,987,756.00 40.00 2 2
geranylgeranyl diphosphate metabolic process
9,746,939.00 12.50 1 4
gibberellin biosynthetic process
33,513.83 0.09 3 3,490
terpene biosynthetic process
32,680.43 0.08 1 1,193
diterpenoid metabolic process
13,286.00 0.03 2 5,869
terpene synthase activity
5,937.28 0.02 5 32,833
diterpenoid biosynthetic process
5,733.49 0.01 2 13,600
terpenoid biosynthetic process
952.32 0.00 5 204,698
defense response
327.74 0.00 2 237,916
Totals 48 41335113
No co-occurrence statistics for GO:0051498 based on MANUAL annotations
The top 4 of 4 co-occurring terms
Co-occurring Term PR S% #Together #Compared
syn-copalyl diphosphate synthase activity
645,899.50 100.00 2 2
aphidicolan-16 beta-ol synthase activity
645,899.50 50.00 1 1
geranylgeranyl diphosphate metabolic process
161,474.88 20.00 1 4
terpene biosynthetic process
19,572.71 2.94 1 33
Totals 5 40

Change Log

Timestamp Action Category Detail
2018-07-13 Deleted XREF RHEA:25527
2018-07-13 Added XREF RHEA:25524
2011-09-16 Added XREF RHEA:25527
2010-08-15 Added DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = 9alpha-copalyl diphosphate.
2010-08-15 Deleted DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
2009-05-21 Added XREF MetaCyc:RXN-8528
2009-05-21 Deleted XREF MetaCyc:RXN-4861
2009-05-21 Added XREF EC:5.5.1.14
2008-05-13 Added DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
2008-05-12 Deleted DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
Timestamp Action Category Detail
2005-07-25 Added TERM syn-copalyl diphosphate synthase activity
Timestamp Action Category Detail
2010-08-15 Added DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = 9alpha-copalyl diphosphate.
2010-08-15 Deleted DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
2008-05-13 Added DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
2008-05-12 Deleted DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
2007-08-09 Deleted SYNONYM diterpene cyclase activity
2007-08-09 Added SYNONYM diterpene cyclase activity
2005-07-25 Added DEFINITION Catalysis of the reaction: geranylgeranyl diphosphate = syn-copalyl diphosphate.
2005-07-25 Added SYNONYM diterpene cyclase activity
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0016872 (intramolecular lyase activity)
Timestamp Action Category Detail
2018-07-13 Deleted XREF RHEA:25527
2018-07-13 Added XREF RHEA:25524
2011-09-16 Added XREF RHEA:25527
2009-05-21 Added XREF MetaCyc:RXN-8528
2009-05-21 Deleted XREF MetaCyc:RXN-4861
2009-05-21 Added XREF EC:5.5.1.14
2005-07-25 Added XREF MetaCyc:RXN-4861
Timestamp Action Category Detail
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