GO:0052645
JSON
F420-0 metabolic process
Biological Process
Definition (GO:0052645 GONUTS page)
The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
F(420)-0 metabolic process | exact |
coenzyme F420-0 metabolism | exact |
F420-0 metabolism | exact |
coenzyme F420-0 metabolic process | exact |
Ancestor Chart
Ancestor chart for GO:0052645
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR024901 | FAPy deformylase |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_input_or_output | CHEBI | CHEBI:59907 | F420-0(3-) |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0052645 based on ALL annotations
The top 45 of 45 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
F420-0 metabolic process
|
22,179.86 | 100.00 | 8,789 | 8,789 |
phospholactate guanylyltransferase activity
|
14,030.77 | 42.36 | 4,938 | 7,806 |
coenzyme F420-1:gamma-L-glutamate ligase activity
|
17,920.15 | 18.58 | 1,708 | 2,114 |
guanylyltransferase activity
|
3,717.03 | 14.07 | 4,103 | 24,483 |
oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
|
14,623.80 | 12.14 | 1,138 | 1,726 |
coenzyme F420-0 gamma-glutamyl ligase activity
|
4,592.16 | 11.17 | 1,717 | 8,293 |
coenzyme F420-0:L-glutamate ligase activity
|
3,550.51 | 9.65 | 1,717 | 10,726 |
LPPG:FO 2-phospho-L-lactate transferase activity
|
1,638.73 | 5.93 | 2,025 | 27,408 |
phosphotransferase activity, alcohol group as acceptor
|
311.91 | 1.34 | 2,024 | 143,926 |
2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity
|
18,863.24 | 1.03 | 91 | 107 |
Totals | 49262 | 177535251 |
No co-occurrence statistics for GO:0052645 based on MANUAL annotations
The top 6 of 6 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
F420-0 metabolic process
|
645,899.50 | 100.00 | 2 | 2 |
phospholactate guanylyltransferase activity
|
645,899.50 | 50.00 | 1 | 1 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
|
3,229.50 | 0.50 | 1 | 200 |
riboflavin biosynthetic process
|
1,302.22 | 0.20 | 1 | 496 |
ferrous iron binding
|
448.54 | 0.07 | 1 | 1,440 |
protein homodimerization activity
|
121.43 | 0.02 | 1 | 5,319 |
Totals | 7 | 7458 |
Change Log
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- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-07-13 | Deleted | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2024-05-30 | Deleted | RELATION | is a GO:1901360 (obsolete organic cyclic compound metabolic process) |
2024-04-17 | Deleted | RELATION | is a GO:0046483 (obsolete heterocycle metabolic process) |
2012-11-05 | Added | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2012-11-05 | Deleted | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-09-19 | Deleted | RELATION | is a GO:0032787 (monocarboxylic acid metabolic process) |
2012-09-19 | Added | RELATION | is a GO:0046483 (obsolete heterocycle metabolic process) |
2012-09-19 | Added | RELATION | is a GO:0019520 (aldonic acid metabolic process) |
2012-09-19 | Added | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-09-19 | Added | RELATION | is a GO:1901360 (obsolete organic cyclic compound metabolic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-09-24 | Added | TERM | F420-0 metabolic process |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-09-25 | Added | SYNONYM | F(420)-0 metabolic process |
2010-09-24 | Added | SYNONYM | F420-0 metabolism |
2010-09-24 | Added | SYNONYM | coenzyme F420-0 metabolic process |
2010-09-24 | Added | SYNONYM | coenzyme F420-0 metabolism |
2010-09-24 | Added | DEFINITION | The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-07-13 | Deleted | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2024-05-30 | Deleted | RELATION | is a GO:1901360 (obsolete organic cyclic compound metabolic process) |
2024-04-17 | Deleted | RELATION | is a GO:0046483 (obsolete heterocycle metabolic process) |
2012-11-05 | Added | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2012-11-05 | Deleted | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-09-19 | Deleted | RELATION | is a GO:0032787 (monocarboxylic acid metabolic process) |
2012-09-19 | Added | RELATION | is a GO:0046483 (obsolete heterocycle metabolic process) |
2012-09-19 | Added | RELATION | is a GO:0019520 (aldonic acid metabolic process) |
2012-09-19 | Added | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-09-19 | Added | RELATION | is a GO:1901360 (obsolete organic cyclic compound metabolic process) |
2010-09-24 | Added | RELATION | is a GO:0032787 (monocarboxylic acid metabolic process) |
2010-09-24 | Added | RELATION | is a GO:0052648 (ribitol phosphate metabolic process) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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