This term is obsolete.

GO:0052645 JSON

F420-0 metabolic process

Biological Process

Definition (GO:0052645 GONUTS page)

The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues.

8,791 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
F(420)-0 metabolic process exact
coenzyme F420-0 metabolism exact
F420-0 metabolism exact
coenzyme F420-0 metabolic process exact

Ancestor Chart

Ancestor chart for GO:0052645
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Ancestor chart

Cross-references

Database ID Description
InterPro IPR024901 FAPy deformylase

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_input_or_output CHEBI CHEBI:59907 F420-0(3-)

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0052645 based on ALL annotations
The top 45 of 45 co-occurring terms
Co-occurring Term PR S% #Together #Compared
F420-0 metabolic process
22,179.86 100.00 8,789 8,789
phospholactate guanylyltransferase activity
14,030.77 42.36 4,938 7,806
coenzyme F420-1:gamma-L-glutamate ligase activity
17,920.15 18.58 1,708 2,114
guanylyltransferase activity
3,717.03 14.07 4,103 24,483
oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
14,623.80 12.14 1,138 1,726
coenzyme F420-0 gamma-glutamyl ligase activity
4,592.16 11.17 1,717 8,293
coenzyme F420-0:L-glutamate ligase activity
3,550.51 9.65 1,717 10,726
LPPG:FO 2-phospho-L-lactate transferase activity
1,638.73 5.93 2,025 27,408
phosphotransferase activity, alcohol group as acceptor
311.91 1.34 2,024 143,926
2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity
18,863.24 1.03 91 107
Totals 49262 177535251
No co-occurrence statistics for GO:0052645 based on MANUAL annotations
The top 6 of 6 co-occurring terms
Co-occurring Term PR S% #Together #Compared
F420-0 metabolic process
645,899.50 100.00 2 2
phospholactate guanylyltransferase activity
645,899.50 50.00 1 1
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
3,229.50 0.50 1 200
riboflavin biosynthetic process
1,302.22 0.20 1 496
ferrous iron binding
448.54 0.07 1 1,440
protein homodimerization activity
121.43 0.02 1 5,319
Totals 7 7458

Change Log

Timestamp Action Category Detail
2024-07-13 Deleted RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2024-05-30 Deleted RELATION is a GO:1901360 (obsolete organic cyclic compound metabolic process)
2024-04-17 Deleted RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2012-11-05 Added RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2012-11-05 Deleted RELATION is a GO:0006807 (obsolete nitrogen compound metabolic process)
2012-09-19 Deleted RELATION is a GO:0032787 (monocarboxylic acid metabolic process)
2012-09-19 Added RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2012-09-19 Added RELATION is a GO:0019520 (aldonic acid metabolic process)
2012-09-19 Added RELATION is a GO:0006807 (obsolete nitrogen compound metabolic process)
2012-09-19 Added RELATION is a GO:1901360 (obsolete organic cyclic compound metabolic process)
Timestamp Action Category Detail
2010-09-24 Added TERM F420-0 metabolic process
Timestamp Action Category Detail
2011-09-25 Added SYNONYM F(420)-0 metabolic process
2010-09-24 Added SYNONYM F420-0 metabolism
2010-09-24 Added SYNONYM coenzyme F420-0 metabolic process
2010-09-24 Added SYNONYM coenzyme F420-0 metabolism
2010-09-24 Added DEFINITION The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues.
Timestamp Action Category Detail
2024-07-13 Deleted RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2024-05-30 Deleted RELATION is a GO:1901360 (obsolete organic cyclic compound metabolic process)
2024-04-17 Deleted RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2012-11-05 Added RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2012-11-05 Deleted RELATION is a GO:0006807 (obsolete nitrogen compound metabolic process)
2012-09-19 Deleted RELATION is a GO:0032787 (monocarboxylic acid metabolic process)
2012-09-19 Added RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2012-09-19 Added RELATION is a GO:0019520 (aldonic acid metabolic process)
2012-09-19 Added RELATION is a GO:0006807 (obsolete nitrogen compound metabolic process)
2012-09-19 Added RELATION is a GO:1901360 (obsolete organic cyclic compound metabolic process)
2010-09-24 Added RELATION is a GO:0032787 (monocarboxylic acid metabolic process)
2010-09-24 Added RELATION is a GO:0052648 (ribitol phosphate metabolic process)
Timestamp Action Category Detail
Timestamp Action Category Detail
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