GO:0060041
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retina development in camera-type eye
Biological Process
Definition (GO:0060041 GONUTS page)
The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.
Secondary IDs
GO:0002073
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
retinal development | related |
retina development in camera-style eye | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0060041
Child Term | Relationship to GO:0060041 |
---|---|
retina morphogenesis in camera-type eye
|
part_of |
positive regulation of retina development in camera-type eye
|
positively_regulates |
retinal pigment epithelium development
|
part_of |
regulation of retina development in camera-type eye
|
regulates |
neural retina development
|
part_of |
retina vasculature development in camera-type eye
|
part_of |
negative regulation of retina development in camera-type eye
|
negatively_regulates |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0060041 | retina development in camera-type eye | Only in Taxon | 7742 | Vertebrata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P21275 | 10090 | BMP4_MOUSE | GO:0001654 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000316 from this reference: PMID:16154126 | |
NOT-qualified manual | protein | Q06826 | 10116 | BMP4_RAT | GO:0001654 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR017302 | Neuronal migration protein doublecortin, chordates |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0060041 based on ALL annotations
The top 100 of 3,007 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
retina development in camera-type eye
|
14,760.26 | 100.00 | 13,207 | 13,207 |
photoreceptor cell development
|
12,840.75 | 27.54 | 3,793 | 4,360 |
axoneme assembly
|
2,632.62 | 12.17 | 3,656 | 20,498 |
photoreceptor outer segment
|
1,360.73 | 6.50 | 2,384 | 25,860 |
negative regulation of centriole replication
|
2,988.71 | 5.66 | 962 | 4,751 |
retina layer formation
|
3,717.74 | 5.17 | 806 | 3,200 |
photoreceptor cell maintenance
|
1,654.35 | 5.13 | 1,142 | 10,189 |
photoreceptor cell outer segment organization
|
4,175.60 | 4.35 | 645 | 2,280 |
eye photoreceptor cell development
|
2,614.72 | 4.15 | 679 | 3,833 |
axoneme
|
671.56 | 4.08 | 3,747 | 82,356 |
Totals | 65186 | 756107 |
No co-occurrence statistics for GO:0060041 based on MANUAL annotations
The top 100 of 2,671 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
retina development in camera-type eye
|
2,053.73 | 100.00 | 629 | 629 |
photoreceptor cell development
|
929.59 | 6.31 | 43 | 95 |
photoreceptor cell maintenance
|
337.36 | 6.20 | 57 | 347 |
forebrain development
|
274.11 | 6.18 | 65 | 487 |
gene expression
|
183.77 | 5.85 | 91 | 1,017 |
neural precursor cell proliferation
|
396.94 | 5.60 | 46 | 238 |
photoreceptor outer segment membrane
|
526.60 | 5.37 | 40 | 156 |
type B pancreatic cell differentiation
|
840.16 | 5.29 | 36 | 88 |
eye photoreceptor cell development
|
482.50 | 5.16 | 39 | 166 |
camera-type eye development
|
235.60 | 5.11 | 53 | 462 |
Totals | 3390 | 29732 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2015-11-21 | Added | RELATION | is a GO:0048856 (anatomical structure development) |
2015-11-21 | Deleted | RELATION | is a GO:0009888 (tissue development) |
2015-06-25 | Deleted | RELATION | is a GO:0048856 (anatomical structure development) |
2014-07-22 | Added | RELATION | is a GO:0009888 (tissue development) |
2009-08-31 | Deleted | SYNONYM | retina development (sensu Mammalia) |
2009-01-12 | Added | SYNONYM | retinal development |
2008-05-13 | Added | DEFINITION | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
2008-05-12 | Deleted | DEFINITION | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
2008-04-01 | Updated | RELATION | part of GO:0043010 (camera-type eye development) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-02-12 | Added | TERM | retina development in camera-type eye |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-08-31 | Deleted | SYNONYM | retina development (sensu Mammalia) |
2009-01-12 | Added | SYNONYM | retinal development |
2008-05-13 | Added | DEFINITION | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
2008-05-12 | Deleted | DEFINITION | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
2007-08-09 | Added | SYNONYM | retina development (sensu Mammalia) |
2007-08-09 | Deleted | SYNONYM | retina development in camera-style eye |
2007-08-09 | Added | SYNONYM | retina development in camera-style eye |
2007-08-09 | Deleted | SYNONYM | retina development (sensu Mammalia) |
2007-02-24 | Added | SYNONYM | retina development in camera-style eye |
2007-02-24 | Added | SYNONYM | retina development (sensu Mammalia) |
2007-02-20 | Updated | DEFINITION | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
2007-02-16 | Added | DEFINITION | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-11-21 | Added | RELATION | is a GO:0048856 (anatomical structure development) |
2015-11-21 | Deleted | RELATION | is a GO:0009888 (tissue development) |
2015-06-25 | Deleted | RELATION | is a GO:0048856 (anatomical structure development) |
2014-07-22 | Added | RELATION | is a GO:0009888 (tissue development) |
2008-04-01 | Updated | RELATION | part of GO:0043010 (camera-type eye development) |
2008-04-01 | Updated | RELATION | is a GO:0048856 (anatomical structure development) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2007-02-24 | Added | SECONDARY | GO:0002073 (retina development (sensu Mammalia)) |
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