GO:0060042
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retina morphogenesis in camera-type eye
Biological Process
Definition (GO:0060042 GONUTS page)
The process in which the anatomical structure of the retina is generated and organized.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
retina morphogenesis in camera-style eye | exact |
retinogenesis | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0060042
Child Term | Relationship to GO:0060042 |
---|---|
post-embryonic retina morphogenesis in camera-type eye
|
part_of |
retina layer formation
|
part_of |
embryonic retina morphogenesis in camera-type eye
|
part_of |
camera-type eye photoreceptor cell differentiation
|
part_of |
retinal bipolar neuron differentiation
|
part_of |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0060042 | retina morphogenesis in camera-type eye | Only in Taxon | 7742 | Vertebrata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P21275 | 10090 | BMP4_MOUSE | GO:0001654 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000316 from this reference: PMID:16154126 | |
NOT-qualified manual | protein | Q06826 | 10116 | BMP4_RAT | GO:0001654 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0060042 based on ALL annotations
The top 100 of 823 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
retina morphogenesis in camera-type eye
|
108,299.33 | 100.00 | 1,800 | 1,800 |
photoreceptor cell outer segment organization
|
18,952.38 | 10.84 | 399 | 2,280 |
establishment of blood-brain barrier
|
17,299.76 | 7.95 | 246 | 1,540 |
retina vasculature development in camera-type eye
|
19,247.51 | 7.92 | 225 | 1,266 |
establishment of blood-retinal barrier
|
50,132.63 | 7.87 | 156 | 337 |
extracellular matrix-cell signaling
|
50,113.66 | 7.55 | 149 | 322 |
retinal blood vessel morphogenesis
|
30,555.88 | 7.18 | 158 | 560 |
optic nerve development
|
19,600.19 | 6.81 | 177 | 978 |
retina layer formation
|
10,559.18 | 6.66 | 312 | 3,200 |
negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator
|
22,589.06 | 6.04 | 141 | 676 |
Totals | 12327 | 88840 |
No co-occurrence statistics for GO:0060042 based on MANUAL annotations
The top 100 of 733 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
retina morphogenesis in camera-type eye
|
9,786.36 | 100.00 | 132 | 132 |
glomerular parietal epithelial cell differentiation
|
6,990.25 | 10.87 | 15 | 21 |
positive regulation of nephron tubule epithelial cell differentiation
|
4,448.34 | 10.00 | 15 | 33 |
retina layer formation
|
1,237.80 | 9.07 | 32 | 253 |
establishment of blood-retinal barrier
|
5,088.91 | 9.03 | 13 | 25 |
camera-type eye photoreceptor cell differentiation
|
1,841.00 | 8.88 | 19 | 101 |
photoreceptor cell outer segment organization
|
1,495.14 | 8.66 | 22 | 144 |
prominosome
|
2,258.39 | 8.24 | 15 | 65 |
podocyte differentiation
|
1,706.92 | 7.39 | 15 | 86 |
eye photoreceptor cell development
|
1,179.08 | 7.19 | 20 | 166 |
Totals | 976 | 9639 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2017-08-13 | Deleted | RELATION | is a GO:0044767 (single-organism developmental process) |
2016-06-22 | Added | RELATION | is a GO:0044767 (single-organism developmental process) |
2016-06-22 | Added | RELATION | is a GO:0009653 (anatomical structure morphogenesis) |
2016-06-22 | Deleted | RELATION | is a GO:0048729 (tissue morphogenesis) |
2015-06-25 | Deleted | RELATION | is a GO:0044767 (single-organism developmental process) |
2015-06-25 | Deleted | RELATION | is a GO:0009653 (anatomical structure morphogenesis) |
2014-11-13 | Added | RELATION | is a GO:0048729 (tissue morphogenesis) |
2013-03-11 | Deleted | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2012-12-23 | Added | RELATION | is a GO:0044767 (single-organism developmental process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-02-12 | Added | TERM | retina morphogenesis in camera-type eye |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-12-12 | Added | DEFINITION | The process in which the anatomical structure of the retina is generated and organized. |
2010-12-12 | Deleted | DEFINITION | The process by which the anatomical structure of the retina is generated and organized. |
2010-12-01 | Added | DEFINITION | The process by which the anatomical structure of the retina is generated and organized. |
2010-12-01 | Deleted | DEFINITION | The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form. |
2008-05-13 | Added | DEFINITION | The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form. |
2008-05-12 | Deleted | DEFINITION | The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form. |
2007-08-09 | Added | SYNONYM | retinogenesis |
2007-08-09 | Deleted | SYNONYM | retinogenesis |
2007-08-09 | Added | SYNONYM | retina morphogenesis in camera-style eye |
2007-08-09 | Deleted | SYNONYM | retina morphogenesis in camera-style eye |
2007-03-13 | Updated | DEFINITION | The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form. |
2007-02-24 | Added | SYNONYM | retina morphogenesis in camera-style eye |
2007-02-20 | Updated | DEFINITION | The process by which the anatomical structures of the retina are generated and organized. Morphogenesis pertains to the creation of form. |
2007-02-16 | Added | DEFINITION | The process by which the anatomical structures of the retina are generated and organized. Morphogenesis pertains to the creation of form. |
2007-02-12 | Added | SYNONYM | retinogenesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-08-13 | Deleted | RELATION | is a GO:0044767 (single-organism developmental process) |
2016-06-22 | Added | RELATION | is a GO:0044767 (single-organism developmental process) |
2016-06-22 | Added | RELATION | is a GO:0009653 (anatomical structure morphogenesis) |
2016-06-22 | Deleted | RELATION | is a GO:0048729 (tissue morphogenesis) |
2015-06-25 | Deleted | RELATION | is a GO:0044767 (single-organism developmental process) |
2015-06-25 | Deleted | RELATION | is a GO:0009653 (anatomical structure morphogenesis) |
2014-11-13 | Added | RELATION | is a GO:0048729 (tissue morphogenesis) |
2013-03-11 | Deleted | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2012-12-23 | Added | RELATION | is a GO:0044767 (single-organism developmental process) |
2012-10-29 | Added | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2008-04-01 | Updated | RELATION | part of GO:0060041 (retina development in camera-type eye) |
2008-04-01 | Updated | RELATION | part of GO:0048593 (camera-type eye morphogenesis) |
2008-04-01 | Updated | RELATION | is a GO:0009653 (anatomical structure morphogenesis) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
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