This term is obsolete.

GO:0060561 JSON

apoptotic process involved in morphogenesis

Biological Process

Definition (GO:0060561 GONUTS page)

Any apoptotic process that contributes to the shaping of an anatomical structure.

1,919 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
apoptosis involved in morphogenesis narrow
morphogenetic apoptosis related
apoptosis involved in development related

Ancestor Chart

Ancestor chart for GO:0060561
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0060561

Child Term Relationship to
GO:0060561
apoptotic process involved in embryonic digit morphogenesis
is_a
negative regulation of apoptotic process involved in morphogenesis
negatively_regulates
epithelial cell apoptotic process involved in palatal shelf morphogenesis
is_a
regulation of apoptotic process involved in morphogenesis
regulates
positive regulation of apoptotic process involved in morphogenesis
positively_regulates
apoptotic process involved in mammary gland involution
is_a
apoptotic process involved in tube lumen cavitation
is_a
clearance of cells from fusion plate by apoptotic process
is_a
mesenchymal cell apoptotic process involved in nephron morphogenesis
is_a
apoptotic process involved in heart morphogenesis
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating cell death and apoptosis using the new guidelines Link

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0060561 apoptotic process involved in morphogenesis Never in Taxon 4896 Schizosaccharomyces pombe
GO:0060561 apoptotic process involved in morphogenesis Only in Taxon 33154 Opisthokonta

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A1D5Q3B3 9544 A0A1D5Q3B3_MACMU GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2I2YB08 9595 A0A2I2YB08_GORGO GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2J8LBR9 9598 A0A2J8LBR9_PANTR GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2U9DQQ6 7955 A0A2U9DQQ6_DANRE GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A3Q2LIL1 9796 A0A3Q2LIL1_HORSE GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A9L0RP63 9796 A0A9L0RP63_HORSE GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein B8A526 7955 B8A526_DANRE GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein F1SV36 9823 F1SV36_PIG GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein F1SV37 9823 F1SV37_PIG GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein F6RKH7 9258 F6RKH7_ORNAN GO:0006915 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0060561 based on ALL annotations
The top 100 of 441 co-occurring terms
Co-occurring Term PR S% #Together #Compared
apoptotic process involved in morphogenesis
314,417.38 100.00 620 620
negative regulation of intracellular transport
126,209.81 14.43 114 284
forebrain neuroblast division
192,636.02 12.89 87 142
trachea gland development
154,544.14 12.25 87 177
anatomical structure regression
114,934.09 11.28 87 238
positive regulation of cell proliferation in bone marrow
117,055.83 11.24 86 231
formation of radial glial scaffolds
109,856.68 11.13 87 249
Scrib-APC-beta-catenin complex
147,622.80 10.89 77 164
regulation of endothelial cell chemotaxis to fibroblast growth factor
99,470.23 10.77 87 275
negative regulation of apoptotic process in bone marrow cell
91,972.44 10.39 86 294
Totals 9083 164621
No co-occurrence statistics for GO:0060561 based on MANUAL annotations
The top 100 of 397 co-occurring terms
Co-occurring Term PR S% #Together #Compared
apoptotic process involved in morphogenesis
33,123.05 100.00 39 39
Scrib-APC-beta-catenin complex
22,082.04 18.60 8 12
establishment of apical/basal cell polarity
10,684.86 16.67 10 31
myelin sheath abaxonal region
12,618.31 15.38 8 21
cochlear nucleus development
11,521.06 14.81 8 23
synaptic vesicle targeting
10,191.71 14.04 8 26
polarized epithelial cell differentiation
9,463.73 13.56 8 28
mammary gland duct morphogenesis
7,844.93 13.24 9 38
establishment of T cell polarity
7,270.91 12.68 9 41
extrinsic component of postsynaptic density membrane
7,245.67 10.94 7 32
Totals 505 7804

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:33154 (Opisthokonta)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe)
2016-06-01 Deleted RELATION is a GO:0010623 (programmed cell death involved in cell development)
2014-03-07 Added RELATION is a GO:1902742 (apoptotic process involved in development)
2014-03-07 Deleted RELATION is a GO:0006915 (apoptotic process)
2013-11-28 Deleted RELATION is a GO:0044767 (single-organism developmental process)
2013-03-10 Added SYNONYM apoptosis involved in development
2013-03-10 Deleted RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2012-12-21 Added RELATION is a GO:0044767 (single-organism developmental process)
2012-11-21 Deleted DEFINITION The process of apoptosis that contributes to the shaping of an anatomical structure.
Timestamp Action Category Detail
2012-04-01 Updated TERM apoptotic process involved in morphogenesis
2009-05-03 Added TERM apoptosis involved in morphogenesis
Timestamp Action Category Detail
2013-03-10 Added SYNONYM apoptosis involved in development
2012-11-21 Deleted DEFINITION The process of apoptosis that contributes to the shaping of an anatomical structure.
2012-11-21 Added DEFINITION Any apoptotic process that contributes to the shaping of an anatomical structure.
2012-04-01 Added SYNONYM apoptosis involved in morphogenesis
2009-05-03 Added DEFINITION The process of apoptosis that contributes to the shaping of an anatomical structure.
2009-05-03 Added SYNONYM morphogenetic apoptosis
Timestamp Action Category Detail
2016-06-01 Deleted RELATION is a GO:0010623 (programmed cell death involved in cell development)
2014-03-07 Added RELATION is a GO:1902742 (apoptotic process involved in development)
2014-03-07 Deleted RELATION is a GO:0006915 (apoptotic process)
2013-11-28 Deleted RELATION is a GO:0044767 (single-organism developmental process)
2013-03-10 Deleted RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2012-12-21 Added RELATION is a GO:0044767 (single-organism developmental process)
2012-10-29 Added RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2009-05-11 Added RELATION is a GO:0010623 (programmed cell death involved in cell development)
2009-05-03 Added RELATION is a GO:0006915 (apoptotic process)
2009-05-03 Added RELATION part of GO:0009653 (anatomical structure morphogenesis)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:33154 (Opisthokonta)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe)
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