This term is obsolete.

GO:0070180 JSON

large ribosomal subunit rRNA binding

Molecular Function

Definition (GO:0070180 GONUTS page)

Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.

170,275 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
LSU rRNA binding exact
25S rRNA binding exact

Ancestor Chart

Ancestor chart for GO:0070180
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0070180

Child Term Relationship to
GO:0070180
mitochondrial ribosomal large subunit rRNA binding
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein B1WC40 10116 NCBP2_RAT GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P52298 9606 NCBP2_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:7478990
NOT-qualified manual protein P52299 8355 NCBP2_XENLA GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q15287 9606 RNPS1_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:22388736
NOT-qualified manual protein Q23500 6239 ACOHC_CAEEL GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12438312
NOT-qualified manual protein Q52KI8 10090 SRRM1_MOUSE GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: PMID:9531537
NOT-qualified manual protein Q6AYK1 10116 RNPS1_RAT GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q6QN14 9606 U17L6_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17109758
NOT-qualified manual protein Q9CQ49 10090 NCBP2_MOUSE GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q9YH12 8319 LSM14_PLEWA GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9851867

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0070180 based on ALL annotations
The top 100 of 328 co-occurring terms
Co-occurring Term PR S% #Together #Compared
large ribosomal subunit rRNA binding
1,146.15 100.00 170,081 170,081
large ribosomal subunit
214.51 15.40 79,123 422,765
cytosolic large ribosomal subunit
149.78 12.34 116,955 894,979
rRNA binding
80.65 6.95 143,306 2,036,482
ribonucleoprotein complex
51.88 4.53 169,229 3,738,529
ribosomal large subunit assembly
64.19 2.79 8,949 159,797
cytoplasmic translation
59.05 2.70 9,160 177,789
mitochondrial large ribosomal subunit
46.18 1.90 5,894 146,273
ribosome
17.50 1.53 169,242 11,084,221
structural constituent of ribosome
16.59 1.45 155,795 10,760,611
Totals 1230130 146779823
No co-occurrence statistics for GO:0070180 based on MANUAL annotations
The top 100 of 143 co-occurring terms
Co-occurring Term PR S% #Together #Compared
large ribosomal subunit rRNA binding
1,289.22 100.00 1,002 1,002
cytosolic large ribosomal subunit
101.71 7.73 791 10,026
translation
79.33 5.63 401 6,517
structural constituent of ribosome
60.41 4.68 961 20,510
large ribosomal subunit
200.83 4.63 62 398
cytoplasmic translation
66.45 4.40 232 4,501
mitochondrial large ribosomal subunit
62.64 3.73 139 2,861
cytosolic ribosome
25.86 0.79 13 648
ribosomal large subunit assembly
14.69 0.47 8 702
ribosome
6.41 0.31 8 1,608
Totals 3807 169256

Change Log

Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2021-05-24 Added DEFINITION Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2014-06-26 Added SYNONYM LSU rRNA binding
2014-06-26 Updated TERM large ribosomal subunit rRNA binding
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2009-07-03 Deleted DEFINITION Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2009-01-12 Added DEFINITION Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2009-01-12 Added TERM LSU rRNA binding
2009-01-12 Added RELATION is a GO:0019843 (rRNA binding)
2009-01-12 Added SYNONYM 25S rRNA binding
Timestamp Action Category Detail
2014-06-26 Updated TERM large ribosomal subunit rRNA binding
2009-01-12 Added TERM LSU rRNA binding
Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2021-05-24 Added DEFINITION Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2014-06-26 Added SYNONYM LSU rRNA binding
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2009-07-03 Deleted DEFINITION Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2009-01-12 Added DEFINITION Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
2009-01-12 Added SYNONYM 25S rRNA binding
Timestamp Action Category Detail
2009-01-12 Added RELATION is a GO:0019843 (rRNA binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
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