GO:0070180
JSON
large ribosomal subunit rRNA binding
Molecular Function
Definition (GO:0070180 GONUTS page)
Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
LSU rRNA binding | exact |
25S rRNA binding | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0070180
Child Term | Relationship to GO:0070180 |
---|---|
mitochondrial ribosomal large subunit rRNA binding
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | B1WC40 | 10116 | NCBP2_RAT | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P52298 | 9606 | NCBP2_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:7478990 | |
NOT-qualified manual | protein | P52299 | 8355 | NCBP2_XENLA | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q15287 | 9606 | RNPS1_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:22388736 | |
NOT-qualified manual | protein | Q23500 | 6239 | ACOHC_CAEEL | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12438312 | |
NOT-qualified manual | protein | Q52KI8 | 10090 | SRRM1_MOUSE | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: PMID:9531537 | |
NOT-qualified manual | protein | Q6AYK1 | 10116 | RNPS1_RAT | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q6QN14 | 9606 | U17L6_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17109758 | |
NOT-qualified manual | protein | Q9CQ49 | 10090 | NCBP2_MOUSE | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q9YH12 | 8319 | LSM14_PLEWA | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9851867 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0070180 based on ALL annotations
The top 100 of 328 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
large ribosomal subunit rRNA binding
|
1,146.15 | 100.00 | 170,081 | 170,081 |
large ribosomal subunit
|
214.51 | 15.40 | 79,123 | 422,765 |
cytosolic large ribosomal subunit
|
149.78 | 12.34 | 116,955 | 894,979 |
rRNA binding
|
80.65 | 6.95 | 143,306 | 2,036,482 |
ribonucleoprotein complex
|
51.88 | 4.53 | 169,229 | 3,738,529 |
ribosomal large subunit assembly
|
64.19 | 2.79 | 8,949 | 159,797 |
cytoplasmic translation
|
59.05 | 2.70 | 9,160 | 177,789 |
mitochondrial large ribosomal subunit
|
46.18 | 1.90 | 5,894 | 146,273 |
ribosome
|
17.50 | 1.53 | 169,242 | 11,084,221 |
structural constituent of ribosome
|
16.59 | 1.45 | 155,795 | 10,760,611 |
Totals | 1230130 | 146779823 |
No co-occurrence statistics for GO:0070180 based on MANUAL annotations
The top 100 of 143 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
large ribosomal subunit rRNA binding
|
1,289.22 | 100.00 | 1,002 | 1,002 |
cytosolic large ribosomal subunit
|
101.71 | 7.73 | 791 | 10,026 |
translation
|
79.33 | 5.63 | 401 | 6,517 |
structural constituent of ribosome
|
60.41 | 4.68 | 961 | 20,510 |
large ribosomal subunit
|
200.83 | 4.63 | 62 | 398 |
cytoplasmic translation
|
66.45 | 4.40 | 232 | 4,501 |
mitochondrial large ribosomal subunit
|
62.64 | 3.73 | 139 | 2,861 |
cytosolic ribosome
|
25.86 | 0.79 | 13 | 648 |
ribosomal large subunit assembly
|
14.69 | 0.47 | 8 | 702 |
ribosome
|
6.41 | 0.31 | 8 | 1,608 |
Totals | 3807 | 169256 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2021-05-24 | Added | DEFINITION | Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2014-06-26 | Added | SYNONYM | LSU rRNA binding |
2014-06-26 | Updated | TERM | large ribosomal subunit rRNA binding |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2009-01-12 | Added | DEFINITION | Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2009-01-12 | Added | TERM | LSU rRNA binding |
2009-01-12 | Added | RELATION | is a GO:0019843 (rRNA binding) |
2009-01-12 | Added | SYNONYM | 25S rRNA binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-06-26 | Updated | TERM | large ribosomal subunit rRNA binding |
2009-01-12 | Added | TERM | LSU rRNA binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2021-05-24 | Added | DEFINITION | Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2014-06-26 | Added | SYNONYM | LSU rRNA binding |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2009-01-12 | Added | DEFINITION | Interacting selectively with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA. |
2009-01-12 | Added | SYNONYM | 25S rRNA binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-01-12 | Added | RELATION | is a GO:0019843 (rRNA binding) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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