This term is obsolete.

GO:0070337 JSON

3'-flap-structured DNA binding

Molecular Function

Definition (GO:0070337 GONUTS page)

Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule. PMID:15189154

115 annotations

Ancestor Chart

Ancestor chart for GO:0070337
Chart options
Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link
Considerations when annotating from ChiP assay results Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein P40999 284812 PMT1M_SCHPO GO:0003677 To remove over-annotation from InterPro entries IPR001525 and IPR018117; for this particular C5-methyltransferase family member, there is a Ser residue in the active site that may be responsible. Reported by InterPro on 19-10-2012
NOT-qualified manual protein A0A0G2K0G0 10116 A0A0G2K0G0_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1B0GWQ8 10116 A0A1B0GWQ8_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y5Z6 10116 A0A8I5Y5Z6_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5ZKC5 10116 A0A8I5ZKC5_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2T0 10116 A0A8I6A2T0_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A7B9 10116 A0A8I6A7B9_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AB42 10116 A0A8I6AB42_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6ASJ7 10116 A0A8I6ASJ7_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AUW9 10116 A0A8I6AUW9_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0070337 based on ALL annotations
The top 100 of 101 co-occurring terms
Co-occurring Term PR S% #Together #Compared
3'-flap-structured DNA binding
1,709,989.40 100.00 114 114
positive regulation of strand invasion
1,586,588.10 74.38 90 97
telomeric G-quadruplex DNA binding
696,375.75 36.73 90 221
8-hydroxy-2'-deoxyguanosine DNA binding
563,732.80 30.30 90 273
regulation of growth rate
495,833.34 25.57 78 269
telomeric D-loop binding
459,400.12 25.07 90 335
bubble DNA binding
295,592.94 16.64 93 538
MutLalpha complex binding
297,677.10 16.64 90 517
5'-flap-structured DNA binding
1,709,989.50 13.16 15 15
response to UV-C
190,469.11 10.82 90 808
Totals 5695 127437490
No co-occurrence statistics for GO:0070337 based on MANUAL annotations
The top 77 of 77 co-occurring terms
Co-occurring Term PR S% #Together #Compared
3'-flap-structured DNA binding
107,649.92 100.00 12 12
positive regulation of strand invasion
86,119.94 30.77 4 5
8-hydroxy-2'-deoxyguanosine DNA binding
39,145.43 21.05 4 11
telomeric G-quadruplex DNA binding
33,123.05 19.05 4 13
telomeric D-loop binding
30,757.12 18.18 4 14
forked DNA-dependent helicase activity
23,922.21 15.38 4 18
MutLalpha complex binding
18,721.73 12.90 4 23
double-strand break repair via single-strand annealing, removal of nonhomologous ends
20,184.36 12.00 3 16
replication fork arrest at tRNA locus
107,649.91 8.33 1 1
5'-flap-structured DNA binding
107,649.91 8.33 1 1
Totals 264 553916

Change Log

Timestamp Action Category Detail
2021-05-24 Added DEFINITION Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-07-03 Deleted DEFINITION Interacting selectively with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-02-16 Added TERM 3'-flap-structured DNA binding
2009-02-16 Added DEFINITION Interacting selectively with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-02-16 Added RELATION is a GO:0070336 (flap-structured DNA binding)
Timestamp Action Category Detail
2009-02-16 Added TERM 3'-flap-structured DNA binding
Timestamp Action Category Detail
2021-05-24 Added DEFINITION Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-07-03 Deleted DEFINITION Interacting selectively with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
2009-02-16 Added DEFINITION Interacting selectively with a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.
Timestamp Action Category Detail
2009-02-16 Added RELATION is a GO:0070336 (flap-structured DNA binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
Please Wait...

Not found :(

Sorry, but the Term you were trying to view does not exist.

Reported error:

It looks like this may have been caused by:

  • a mistyped URL
  • an out-of-date link
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice and Terms of Use.