GO:0070417
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cellular response to cold
Biological Process
Definition (GO:0070417 GONUTS page)
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
cellular response to cold stress | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0070417
Child Term | Relationship to GO:0070417 |
---|---|
cellular response to freezing
|
is_a |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A1XCI6 | 4577 | A1XCI6_MAIZE | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:17005920 | |
NOT-qualified manual | protein | F4J5N9 | 3702 | F4J5N9_ARATH | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:19248824 | |
NOT-qualified manual | protein | O22788 | 3702 | PXG3_ARATH | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:10965948 | |
NOT-qualified manual | protein | O22914 | 3702 | CP121_ARATH | GO:0070417 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:18974062 | |
NOT-qualified manual | protein | O82345 | 3702 | BAG6_ARATH | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:16636050 | |
NOT-qualified manual | protein | P0DO54 | 4641 | TIP12_MUSAC | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:29778840 | |
NOT-qualified manual | protein | Q43247 | 4577 | G3PC3_MAIZE | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:9037163 | |
NOT-qualified manual | protein | Q43359 | 4577 | Q43359_MAIZE | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:9037163 | |
NOT-qualified manual | protein | Q93WF6 | 3702 | SAG21_ARATH | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:12172015 | |
NOT-qualified manual | protein | Q96262 | 3702 | PCAP1_ARATH | GO:0009409 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:17264065 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR028618 | ATP-dependent RNA helicase DeaD |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0061411 | obsolete positive regulation of transcription from RNA polymerase II promoter in response to cold | consider GO:0070417 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0070417 based on ALL annotations
The top 100 of 1,008 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
cellular response to cold
|
20,933.33 | 100.00 | 9,466 | 9,466 |
RNA strand annealing activity
|
4,935.30 | 22.22 | 7,518 | 31,888 |
response to cold
|
3,480.17 | 16.00 | 7,654 | 46,039 |
ribosomal large subunit assembly
|
976.84 | 4.61 | 7,617 | 163,230 |
hydrolase activity, acting on acid anhydrides
|
676.78 | 2.55 | 1,028 | 31,797 |
RNA helicase activity
|
388.11 | 1.85 | 7,619 | 410,947 |
RNA catabolic process
|
377.94 | 1.80 | 7,509 | 415,912 |
cellular response to abscisic acid stimulus
|
8,528.39 | 1.25 | 121 | 297 |
positive regulation of translation initiation in response to endoplasmic reticulum stress
|
20,933.32 | 1.06 | 100 | 100 |
negative regulation of translation in response to endoplasmic reticulum stress
|
9,963.46 | 1.03 | 99 | 208 |
Totals | 56165 | 1464765 |
No co-occurrence statistics for GO:0070417 based on MANUAL annotations
The top 100 of 778 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
cellular response to cold
|
10,533.83 | 100.00 | 134 | 134 |
temperature homeostasis
|
1,194.56 | 5.00 | 11 | 97 |
regulation of apoptotic DNA fragmentation
|
4,861.77 | 4.26 | 6 | 13 |
lipid droplet fusion
|
2,430.88 | 3.90 | 6 | 26 |
eiF2alpha phosphorylation in response to endoplasmic reticulum stress
|
10,533.83 | 3.73 | 5 | 5 |
positive regulation of translation initiation in response to endoplasmic reticulum stress
|
10,533.83 | 3.73 | 5 | 5 |
negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
|
10,533.83 | 3.73 | 5 | 5 |
regulation of fatty acid metabolic process
|
1,170.43 | 3.68 | 7 | 63 |
glial cell fate commitment
|
4,389.10 | 3.55 | 5 | 12 |
cellular response to salt stress
|
1,038.55 | 3.54 | 7 | 71 |
Totals | 503 | 6312 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2011-05-08 | Added | DEFINITION | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
2011-05-08 | Deleted | DEFINITION | A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
2009-02-25 | Added | SYNONYM | cellular response to cold stress |
2009-02-25 | Added | RELATION | is a GO:0009409 (response to cold) |
2009-02-25 | Added | RELATION | is a GO:0033554 (cellular response to stress) |
2009-02-25 | Added | TERM | cellular response to cold |
2009-02-25 | Added | DEFINITION | A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-02-25 | Added | TERM | cellular response to cold |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-05-08 | Added | DEFINITION | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
2011-05-08 | Deleted | DEFINITION | A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
2009-02-25 | Added | SYNONYM | cellular response to cold stress |
2009-02-25 | Added | DEFINITION | A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-02-25 | Added | RELATION | is a GO:0009409 (response to cold) |
2009-02-25 | Added | RELATION | is a GO:0033554 (cellular response to stress) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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