This term is obsolete.

GO:0070417 JSON

cellular response to cold

Biological Process

Definition (GO:0070417 GONUTS page)

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.

9,347 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
cellular response to cold stress exact

Ancestor Chart

Ancestor chart for GO:0070417
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0070417

Child Term Relationship to
GO:0070417
trehalose metabolism in response to cold stress
is_a
cellular response to freezing
is_a

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A1XCI6 4577 A1XCI6_MAIZE GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:17005920
NOT-qualified manual protein F4J5N9 3702 F4J5N9_ARATH GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:19248824
NOT-qualified manual protein O22788 3702 PXG3_ARATH GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:10965948
NOT-qualified manual protein O22914 3702 CP121_ARATH GO:0070417 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:18974062
NOT-qualified manual protein O82345 3702 BAG6_ARATH GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:16636050
NOT-qualified manual protein P0DO54 4641 TIP12_MUSAC GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:29778840
NOT-qualified manual protein Q43247 4577 G3PC3_MAIZE GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:9037163
NOT-qualified manual protein Q43359 4577 Q43359_MAIZE GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:9037163
NOT-qualified manual protein Q93WF6 3702 SAG21_ARATH GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:12172015
NOT-qualified manual protein Q96262 3702 PCAP1_ARATH GO:0009409 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:17264065

Cross-references

Database ID Description
InterPro IPR028618 ATP-dependent RNA helicase DeaD

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0061411 obsolete positive regulation of transcription from RNA polymerase II promoter in response to cold consider GO:0070417

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0070417 based on ALL annotations
The top 100 of 1,035 co-occurring terms
Co-occurring Term PR S% #Together #Compared
cellular response to cold
20,992.76 100.00 9,286 9,286
RNA strand annealing activity
5,028.06 22.57 7,395 30,875
response to cold
3,470.22 15.92 7,531 45,558
ribosomal large subunit assembly
984.23 4.64 7,492 159,797
hydrolase activity, acting on acid anhydrides
676.99 2.54 1,000 31,009
RNA helicase activity
391.78 1.86 7,494 401,554
RNA catabolic process
376.71 1.79 7,385 411,540
chromatin extrusion motor activity
365.95 1.71 4,325 248,104
ATP-dependent H3-H4 histone complex chaperone activity
365.94 1.71 4,325 248,109
cohesin loader activity
365.65 1.71 4,325 248,310
Totals 80359 2841949
No co-occurrence statistics for GO:0070417 based on MANUAL annotations
The top 100 of 788 co-occurring terms
Co-occurring Term PR S% #Together #Compared
cellular response to cold
9,640.29 100.00 134 134
temperature homeostasis
1,128.12 5.07 11 94
regulation of apoptotic DNA fragmentation
3,856.12 4.20 6 15
lipid droplet fusion
2,224.68 3.90 6 26
eiF2alpha phosphorylation in response to endoplasmic reticulum stress
9,640.29 3.73 5 5
positive regulation of translation initiation in response to endoplasmic reticulum stress
9,640.29 3.73 5 5
regulation of fatty acid metabolic process
1,071.14 3.68 7 63
negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
6,025.18 3.65 5 8
glial cell fate commitment
4,016.79 3.55 5 12
regulation of translational initiation by eIF2 alpha phosphorylation
4,016.79 3.55 5 12
Totals 502 6109

Change Log

Timestamp Action Category Detail
2011-05-08 Deleted DEFINITION A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
2011-05-08 Added DEFINITION Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
2009-02-25 Added SYNONYM cellular response to cold stress
2009-02-25 Added RELATION is a GO:0033554 (cellular response to stress)
2009-02-25 Added RELATION is a GO:0009409 (response to cold)
2009-02-25 Added TERM cellular response to cold
2009-02-25 Added DEFINITION A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
Timestamp Action Category Detail
2009-02-25 Added TERM cellular response to cold
Timestamp Action Category Detail
2011-05-08 Deleted DEFINITION A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
2011-05-08 Added DEFINITION Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
2009-02-25 Added SYNONYM cellular response to cold stress
2009-02-25 Added DEFINITION A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
Timestamp Action Category Detail
2009-02-25 Added RELATION is a GO:0033554 (cellular response to stress)
2009-02-25 Added RELATION is a GO:0009409 (response to cold)
Timestamp Action Category Detail
Timestamp Action Category Detail
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