GO:0070900
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mitochondrial tRNA modification
Biological Process
Definition (GO:0070900 GONUTS page)
The covalent alteration of one or more nucleotides within a mitochondrial tRNA molecule to produce a mitochondrial tRNA molecule with a sequence that differs from that coded genetically.
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0070900
Child Term | Relationship to GO:0070900 |
---|---|
mitochondrial tRNA wobble uridine modification
|
is_a |
mitochondrial tRNA methylation
|
is_a |
mitochondrial tRNA pseudouridine synthesis
|
is_a |
mitochondrial tRNA threonylcarbamoyladenosine modification
|
is_a |
mitochondrial tRNA thio-modification
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0070900 | mitochondrial tRNA modification | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | F4IL30 | 3702 | POP1_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 | |
NOT-qualified manual | protein | O14133 | 284812 | ATE1_SCHPO | GO:0006399 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000303 from this reference: GO_REF:0000051 | |
NOT-qualified manual | protein | Q9SB36 | 3702 | PP337_ARATH | GO:0009451 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264 | |
NOT-qualified manual | protein | Q9ZW76 | 3702 | POP4_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0070900 based on ALL annotations
The top 67 of 67 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mitochondrial tRNA modification
|
826,011.80 | 100.00 | 236 | 236 |
positive regulation of translational fidelity
|
100,204.71 | 9.59 | 74 | 610 |
regulation of cyclin-dependent protein serine/threonine kinase activity
|
66,080.95 | 1.42 | 4 | 50 |
negative regulation of cyclin-dependent protein serine/threonine kinase activity
|
56,318.98 | 1.08 | 3 | 44 |
positive regulation of mitochondrial translation
|
8,498.28 | 1.01 | 81 | 7,873 |
mitochondrial methionyl-tRNA aminoacylation
|
826,011.75 | 0.42 | 1 | 1 |
mitochondrial leucyl-tRNA aminoacylation
|
826,011.75 | 0.42 | 1 | 1 |
tRNA C3-cytosine methylation
|
4,026.52 | 0.42 | 7 | 1,436 |
N6-isopentenyladenosine methylthiotransferase activity
|
2,537.23 | 0.31 | 142 | 46,229 |
mitochondrial tyrosyl-tRNA aminoacylation
|
5,776.31 | 0.26 | 1 | 143 |
Totals | 2660 | 200164020 |
No co-occurrence statistics for GO:0070900 based on MANUAL annotations
The top 38 of 38 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mitochondrial tRNA modification
|
14,353.32 | 100.00 | 90 | 90 |
N6-isopentenyladenosine methylthiotransferase activity
|
10,060.74 | 61.48 | 75 | 107 |
mRNA methyltransferase activity
|
10,047.33 | 7.53 | 7 | 10 |
tRNA C3-cytosine methylation
|
3,139.79 | 6.09 | 7 | 32 |
mRNA metabolic process
|
1,522.32 | 4.70 | 7 | 66 |
tRNA (cytidine-3-)-methyltransferase activity
|
1,395.46 | 4.52 | 7 | 72 |
positive regulation of mitochondrial translation
|
612.23 | 3.08 | 9 | 211 |
regulation of cyclin-dependent protein serine/threonine kinase activity
|
1,148.27 | 2.94 | 4 | 50 |
negative regulation of cyclin-dependent protein serine/threonine kinase activity
|
978.64 | 2.29 | 3 | 44 |
positive regulation of translational fidelity
|
2,609.69 | 2.02 | 2 | 11 |
Totals | 450 | 546549 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-17 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2024-09-11 | Deleted | RELATION | occurs in GO:0005739 (mitochondrion) |
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2018-01-18 | Added | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2017-06-29 | Added | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2017-06-29 | Deleted | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2017-06-28 | Deleted | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2016-12-13 | Deleted | RELATION | is a GO:0000963 (mitochondrial RNA processing) |
2016-12-13 | Added | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2012-06-12 | Added | RELATION | is a GO:1900864 (mitochondrial RNA modification) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-09-04 | Added | TERM | mitochondrial tRNA modification |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-09-04 | Added | DEFINITION | The covalent alteration of one or more nucleotides within a mitochondrial tRNA molecule to produce a mitochondrial tRNA molecule with a sequence that differs from that coded genetically. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-17 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2024-09-11 | Deleted | RELATION | occurs in GO:0005739 (mitochondrion) |
2018-01-18 | Added | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2017-06-29 | Added | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2017-06-29 | Deleted | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2017-06-28 | Deleted | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2016-12-13 | Deleted | RELATION | is a GO:0000963 (mitochondrial RNA processing) |
2016-12-13 | Added | RELATION | is a GO:0090646 (mitochondrial tRNA processing) |
2012-06-12 | Added | RELATION | is a GO:1900864 (mitochondrial RNA modification) |
2011-06-03 | Added | RELATION | is a GO:0000963 (mitochondrial RNA processing) |
2011-05-27 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2009-09-04 | Added | RELATION | is a GO:0070525 (tRNA threonylcarbamoyladenosine metabolic process) |
2009-09-04 | Added | RELATION | is a GO:0006400 (tRNA modification) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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