This term is obsolete.

GO:0070902 JSON

mitochondrial tRNA pseudouridine synthesis

Biological Process

Definition (GO:0070902 GONUTS page)

The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.

101 annotations

Ancestor Chart

Ancestor chart for GO:0070902
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0070902 mitochondrial tRNA pseudouridine synthesis Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein F4IL30 3702 POP1_ARATH GO:0008033 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728
NOT-qualified manual protein O14133 284812 ATE1_SCHPO GO:0006399 1 NOT-qualified manual annotation exists with evidence code ECO:0000303 from this reference: GO_REF:0000051
NOT-qualified manual protein Q9SB36 3702 PP337_ARATH GO:0009451 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264
NOT-qualified manual protein Q9ZW76 3702 POP4_ARATH GO:0008033 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0070902 based on ALL annotations
The top 27 of 27 co-occurring terms
Co-occurring Term PR S% #Together #Compared
mitochondrial tRNA pseudouridine synthesis
1,949,387.90 100.00 100 100
mitochondrial ribosomal large subunit rRNA binding
1,635,503.40 83.19 99 118
tRNA pseudouridine synthase activity
42,378.00 1.28 3 138
positive regulation of mitochondrial translation
24,512.82 1.26 99 7,873
rRNA pseudouridine synthesis
18,065.09 0.93 99 10,683
ribonucleoprotein granule
17,175.99 0.88 99 11,236
steroid receptor RNA activator RNA binding
10,710.92 0.36 1 182
mRNA pseudouridine synthesis
3,081.84 0.16 100 63,254
mitochondrial matrix
877.90 0.05 100 222,050
pseudouridine synthase activity
549.08 0.03 100 355,030
Totals 1427 57496228
No co-occurrence statistics for GO:0070902 based on MANUAL annotations
The top 18 of 18 co-occurring terms
Co-occurring Term PR S% #Together #Compared
mitochondrial tRNA pseudouridine synthesis
430,599.70 100.00 3 3
mitochondrial ribosomal large subunit rRNA binding
287,066.47 50.00 2 3
steroid receptor RNA activator RNA binding
71,766.62 12.50 1 6
positive regulation of mitochondrial translation
4,081.51 0.94 2 211
mRNA pseudouridine synthesis
2,401.11 0.56 3 538
ribonucleoprotein granule
2,213.88 0.51 2 389
rRNA pseudouridine synthesis
1,199.44 0.28 1 359
pseudouridine synthase activity
819.15 0.19 3 1,577
tRNA pseudouridine synthesis
723.70 0.17 1 595
tRNA binding
536.68 0.12 3 2,407
Totals 34 579986

Change Log

Timestamp Action Category Detail
2024-09-17 Added RELATION occurs in GO:0005739 (mitochondrion)
2024-09-11 Deleted RELATION occurs in GO:0005739 (mitochondrion)
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2015-04-24 Added RELATION occurs in GO:0005739 (mitochondrion)
2013-02-02 Deleted RELATION occurs in GO:0005739 (mitochondrion)
2011-05-27 Added RELATION occurs in GO:0005739 (mitochondrion)
2009-09-04 Added DEFINITION The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.
2009-09-04 Added RELATION is a GO:0070900 (mitochondrial tRNA modification)
2009-09-04 Added RELATION is a GO:0031119 (tRNA pseudouridine synthesis)
2009-09-04 Added TERM mitochondrial tRNA pseudouridine synthesis
Timestamp Action Category Detail
2009-09-04 Added TERM mitochondrial tRNA pseudouridine synthesis
Timestamp Action Category Detail
2009-09-04 Added DEFINITION The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.
Timestamp Action Category Detail
2024-09-17 Added RELATION occurs in GO:0005739 (mitochondrion)
2024-09-11 Deleted RELATION occurs in GO:0005739 (mitochondrion)
2015-04-24 Added RELATION occurs in GO:0005739 (mitochondrion)
2013-02-02 Deleted RELATION occurs in GO:0005739 (mitochondrion)
2011-05-27 Added RELATION occurs in GO:0005739 (mitochondrion)
2009-09-04 Added RELATION is a GO:0070900 (mitochondrial tRNA modification)
2009-09-04 Added RELATION is a GO:0031119 (tRNA pseudouridine synthesis)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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