GO:0070902
JSON
mitochondrial tRNA pseudouridine synthesis
Biological Process
Definition (GO:0070902 GONUTS page)
The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.
Ancestor Chart
Ancestor chart for GO:0070902
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0070902 | mitochondrial tRNA pseudouridine synthesis | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | F4IL30 | 3702 | POP1_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 | |
NOT-qualified manual | protein | O14133 | 284812 | ATE1_SCHPO | GO:0006399 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000303 from this reference: GO_REF:0000051 | |
NOT-qualified manual | protein | Q9SB36 | 3702 | PP337_ARATH | GO:0009451 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264 | |
NOT-qualified manual | protein | Q9ZW76 | 3702 | POP4_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0070902 based on ALL annotations
The top 27 of 27 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mitochondrial tRNA pseudouridine synthesis
|
1,949,387.90 | 100.00 | 100 | 100 |
mitochondrial ribosomal large subunit rRNA binding
|
1,635,503.40 | 83.19 | 99 | 118 |
tRNA pseudouridine synthase activity
|
42,378.00 | 1.28 | 3 | 138 |
positive regulation of mitochondrial translation
|
24,512.82 | 1.26 | 99 | 7,873 |
rRNA pseudouridine synthesis
|
18,065.09 | 0.93 | 99 | 10,683 |
ribonucleoprotein granule
|
17,175.99 | 0.88 | 99 | 11,236 |
steroid receptor RNA activator RNA binding
|
10,710.92 | 0.36 | 1 | 182 |
mRNA pseudouridine synthesis
|
3,081.84 | 0.16 | 100 | 63,254 |
mitochondrial matrix
|
877.90 | 0.05 | 100 | 222,050 |
pseudouridine synthase activity
|
549.08 | 0.03 | 100 | 355,030 |
Totals | 1427 | 57496228 |
No co-occurrence statistics for GO:0070902 based on MANUAL annotations
The top 18 of 18 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mitochondrial tRNA pseudouridine synthesis
|
430,599.70 | 100.00 | 3 | 3 |
mitochondrial ribosomal large subunit rRNA binding
|
287,066.47 | 50.00 | 2 | 3 |
steroid receptor RNA activator RNA binding
|
71,766.62 | 12.50 | 1 | 6 |
positive regulation of mitochondrial translation
|
4,081.51 | 0.94 | 2 | 211 |
mRNA pseudouridine synthesis
|
2,401.11 | 0.56 | 3 | 538 |
ribonucleoprotein granule
|
2,213.88 | 0.51 | 2 | 389 |
rRNA pseudouridine synthesis
|
1,199.44 | 0.28 | 1 | 359 |
pseudouridine synthase activity
|
819.15 | 0.19 | 3 | 1,577 |
tRNA pseudouridine synthesis
|
723.70 | 0.17 | 1 | 595 |
tRNA binding
|
536.68 | 0.12 | 3 | 2,407 |
Totals | 34 | 579986 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-17 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2024-09-11 | Deleted | RELATION | occurs in GO:0005739 (mitochondrion) |
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2015-04-24 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2013-02-02 | Deleted | RELATION | occurs in GO:0005739 (mitochondrion) |
2011-05-27 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2009-09-04 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule. |
2009-09-04 | Added | RELATION | is a GO:0070900 (mitochondrial tRNA modification) |
2009-09-04 | Added | RELATION | is a GO:0031119 (tRNA pseudouridine synthesis) |
2009-09-04 | Added | TERM | mitochondrial tRNA pseudouridine synthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-09-04 | Added | TERM | mitochondrial tRNA pseudouridine synthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-09-04 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-17 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2024-09-11 | Deleted | RELATION | occurs in GO:0005739 (mitochondrion) |
2015-04-24 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2013-02-02 | Deleted | RELATION | occurs in GO:0005739 (mitochondrion) |
2011-05-27 | Added | RELATION | occurs in GO:0005739 (mitochondrion) |
2009-09-04 | Added | RELATION | is a GO:0070900 (mitochondrial tRNA modification) |
2009-09-04 | Added | RELATION | is a GO:0031119 (tRNA pseudouridine synthesis) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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