GO:0071168
JSON
protein localization to chromatin
Biological Process
Definition (GO:0071168 GONUTS page)
Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
protein localisation to chromatin | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0071168
Child Term | Relationship to GO:0071168 |
---|---|
protein localization to heterochromatin
|
is_a |
negative regulation of protein localization to chromatin
|
negatively_regulates |
positive regulation of protein localization to chromatin
|
positively_regulates |
protein localization to euchromatin
|
is_a |
regulation of protein localization to chromatin
|
regulates |
establishment of protein localization to chromatin
|
is_a |
protein localization to CENP-A containing chromatin
|
is_a |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P02650 | 10116 | APOE_RAT | GO:0008104 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P04639 | 10116 | APOA1_RAT | GO:0008104 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P08226 | 10090 | APOE_MOUSE | GO:0008104 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9325076 | |
NOT-qualified manual | protein | Q00623 | 10090 | APOA1_MOUSE | GO:0008104 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9325076 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0071168 based on ALL annotations
The top 100 of 818 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
protein localization to chromatin
|
102,383.81 | 100.00 | 1,904 | 1,904 |
MutSbeta complex binding
|
101,270.95 | 9.55 | 182 | 184 |
MutLbeta complex binding
|
101,270.95 | 9.55 | 182 | 184 |
MCM8-MCM9 complex
|
97,559.45 | 9.51 | 182 | 191 |
recombinational interstrand cross-link repair
|
51,474.74 | 8.73 | 182 | 362 |
MutSalpha complex binding
|
31,264.86 | 7.85 | 182 | 596 |
female gamete generation
|
31,419.37 | 7.58 | 174 | 567 |
lncRNA binding
|
10,554.02 | 5.68 | 214 | 2,076 |
positive regulation of single strand break repair
|
57,066.39 | 5.14 | 102 | 183 |
positive regulation of sister chromatid cohesion
|
37,135.82 | 5.11 | 107 | 295 |
Totals | 11903 | 56147 |
No co-occurrence statistics for GO:0071168 based on MANUAL annotations
The top 100 of 728 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
protein localization to chromatin
|
12,302.85 | 100.00 | 105 | 105 |
lncRNA binding
|
1,677.66 | 8.22 | 18 | 132 |
negative regulation of striated muscle cell differentiation
|
7,030.20 | 7.21 | 8 | 14 |
hepatocyte homeostasis
|
6,151.42 | 7.08 | 8 | 16 |
negative regulation of epidermal cell differentiation
|
5,789.58 | 7.02 | 8 | 17 |
skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration
|
5,180.15 | 6.90 | 8 | 19 |
positive regulation of dendritic spine maintenance
|
4,686.80 | 6.78 | 8 | 21 |
regulation of postsynaptic density protein 95 clustering
|
3,393.89 | 6.35 | 8 | 29 |
response to tetrachloromethane
|
3,393.89 | 6.35 | 8 | 29 |
cellular response to trichostatin A
|
3,393.89 | 6.35 | 8 | 29 |
Totals | 724 | 9607 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2010-12-15 | Deleted | DEFINITION | Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
2010-12-15 | Added | DEFINITION | Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
2010-11-17 | Added | SYNONYM | protein localisation to chromatin |
2009-11-24 | Added | RELATION | is a GO:0034502 (protein localization to chromosome) |
2009-11-24 | Added | DEFINITION | Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
2009-11-24 | Added | TERM | protein localization to chromatin |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-11-24 | Added | TERM | protein localization to chromatin |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-12-15 | Deleted | DEFINITION | Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
2010-12-15 | Added | DEFINITION | Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
2010-11-17 | Added | SYNONYM | protein localisation to chromatin |
2009-11-24 | Added | DEFINITION | Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-11-24 | Added | RELATION | is a GO:0034502 (protein localization to chromosome) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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