This term is obsolete.

GO:0071168 JSON

protein localization to chromatin

Biological Process

Definition (GO:0071168 GONUTS page)

Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.

14,606 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
protein localisation to chromatin exact

Ancestor Chart

Ancestor chart for GO:0071168
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0071168

Child Term Relationship to
GO:0071168
protein localization to heterochromatin
is_a
negative regulation of protein localization to chromatin
negatively_regulates
positive regulation of protein localization to chromatin
positively_regulates
protein localization to euchromatin
is_a
regulation of protein localization to chromatin
regulates
establishment of protein localization to chromatin
is_a
protein localization to CENP-A containing chromatin
is_a

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P02650 10116 APOE_RAT GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P04639 10116 APOA1_RAT GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P08226 10090 APOE_MOUSE GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9325076
NOT-qualified manual protein Q00623 10090 APOA1_MOUSE GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9325076

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0071168 based on ALL annotations
The top 100 of 818 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein localization to chromatin
102,383.81 100.00 1,904 1,904
MutSbeta complex binding
101,270.95 9.55 182 184
MutLbeta complex binding
101,270.95 9.55 182 184
MCM8-MCM9 complex
97,559.45 9.51 182 191
recombinational interstrand cross-link repair
51,474.74 8.73 182 362
MutSalpha complex binding
31,264.86 7.85 182 596
female gamete generation
31,419.37 7.58 174 567
lncRNA binding
10,554.02 5.68 214 2,076
positive regulation of single strand break repair
57,066.39 5.14 102 183
positive regulation of sister chromatid cohesion
37,135.82 5.11 107 295
Totals 11903 56147
No co-occurrence statistics for GO:0071168 based on MANUAL annotations
The top 100 of 728 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein localization to chromatin
12,302.85 100.00 105 105
lncRNA binding
1,677.66 8.22 18 132
negative regulation of striated muscle cell differentiation
7,030.20 7.21 8 14
hepatocyte homeostasis
6,151.42 7.08 8 16
negative regulation of epidermal cell differentiation
5,789.58 7.02 8 17
skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration
5,180.15 6.90 8 19
positive regulation of dendritic spine maintenance
4,686.80 6.78 8 21
regulation of postsynaptic density protein 95 clustering
3,393.89 6.35 8 29
response to tetrachloromethane
3,393.89 6.35 8 29
cellular response to trichostatin A
3,393.89 6.35 8 29
Totals 724 9607

Change Log

Timestamp Action Category Detail
2010-12-15 Deleted DEFINITION Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
2010-12-15 Added DEFINITION Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
2010-11-17 Added SYNONYM protein localisation to chromatin
2009-11-24 Added RELATION is a GO:0034502 (protein localization to chromosome)
2009-11-24 Added DEFINITION Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
2009-11-24 Added TERM protein localization to chromatin
Timestamp Action Category Detail
2009-11-24 Added TERM protein localization to chromatin
Timestamp Action Category Detail
2010-12-15 Deleted DEFINITION Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
2010-12-15 Added DEFINITION Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
2010-11-17 Added SYNONYM protein localisation to chromatin
2009-11-24 Added DEFINITION Any process by which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
Timestamp Action Category Detail
2009-11-24 Added RELATION is a GO:0034502 (protein localization to chromosome)
Timestamp Action Category Detail
Timestamp Action Category Detail
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