GO:0072086
JSON
specification of loop of Henle identity
Biological Process
Definition (GO:0072086 GONUTS page)
The process in which the loop of Henle of the kidney nephron acquires its identity.
Secondary IDs
GO:0072083
Acknowledgement
This term was created by the GO Consortium with support from:
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
specification of intermediate tubule identity | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0072086
Child Term | Relationship to GO:0072086 |
---|---|
specification of metanephric loop of Henle identity
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0072086 | specification of loop of Henle identity | Only in Taxon | 7776 | Gnathostomata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A0G2JVK0 | 10116 | A0A0G2JVK0_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JVK0 | 10116 | A0A0G2JVK0_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K7N2 | 10116 | A0A0G2K7N2_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K7N2 | 10116 | A0A0G2K7N2_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JP87 | 10116 | A6JP87_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JP87 | 10116 | A6JP87_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F7FI57 | 10116 | F7FI57_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F7FI57 | 10116 | F7FI57_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O35740 | 10090 | CITE2_MOUSE | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | O35740 | 10090 | CITE2_MOUSE | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0072086 based on ALL annotations
The top 98 of 98 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
specification of loop of Henle identity
|
641,277.90 | 100.00 | 309 | 309 |
proximal/distal pattern formation involved in metanephric nephron development
|
641,277.90 | 50.81 | 157 | 157 |
proximal/distal pattern formation involved in nephron development
|
641,277.90 | 26.86 | 83 | 83 |
His-Purkinje system cell differentiation
|
641,277.90 | 26.21 | 81 | 81 |
glial cell fate commitment
|
574,651.56 | 21.77 | 69 | 77 |
Purkinje myocyte development
|
309,187.53 | 20.45 | 81 | 168 |
negative regulation of inner ear receptor cell differentiation
|
276,551.06 | 17.25 | 69 | 160 |
atrioventricular bundle cell differentiation
|
205,310.31 | 16.84 | 81 | 253 |
metanephric nephron tubule morphogenesis
|
178,420.05 | 14.14 | 69 | 248 |
comma-shaped body morphogenesis
|
162,081.22 | 13.45 | 69 | 273 |
Totals | 8062 | 128646363 |
No co-occurrence statistics for GO:0072086 based on MANUAL annotations
The top 88 of 88 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
specification of loop of Henle identity
|
108,579.45 | 100.00 | 13 | 13 |
proximal/distal pattern formation involved in metanephric nephron development
|
108,579.46 | 46.15 | 6 | 6 |
proximal/distal pattern formation involved in nephron development
|
108,579.46 | 38.46 | 5 | 5 |
His-Purkinje system cell differentiation
|
81,434.60 | 21.43 | 3 | 4 |
Purkinje myocyte development
|
46,534.06 | 17.65 | 3 | 7 |
atrioventricular bundle cell differentiation
|
36,193.16 | 15.79 | 3 | 9 |
negative regulation of inner ear receptor cell differentiation
|
54,289.73 | 13.33 | 2 | 4 |
specification of pronephric tubule identity
|
43,431.79 | 12.50 | 2 | 5 |
maintenance of kidney identity
|
43,431.79 | 12.50 | 2 | 5 |
metanephric nephron tubule morphogenesis
|
36,193.16 | 11.76 | 2 | 6 |
Totals | 295 | 820972 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7776 (Gnathostomata) |
2010-12-17 | Added | DEFINITION | The process in which the loop of Henle of the kidney nephron acquires its identity. |
2010-12-17 | Deleted | DEFINITION | The process by which the loop of Henle of the kidney nephron acquires its identity. |
2010-02-28 | Added | SECONDARY | GO:0072083 (specification of intermediate tubule identity) |
2010-02-28 | Added | SYNONYM | specification of intermediate tubule identity |
2010-02-10 | Added | RELATION | is a GO:0072081 (specification of nephron tubule identity) |
2010-02-10 | Added | TERM | specification of loop of Henle identity |
2010-02-10 | Added | DEFINITION | The process by which the loop of Henle of the kidney nephron acquires its identity. |
2010-02-10 | Added | RELATION | part of GO:0072070 (loop of Henle development) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-02-10 | Added | TERM | specification of loop of Henle identity |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-12-17 | Added | DEFINITION | The process in which the loop of Henle of the kidney nephron acquires its identity. |
2010-12-17 | Deleted | DEFINITION | The process by which the loop of Henle of the kidney nephron acquires its identity. |
2010-02-28 | Added | SYNONYM | specification of intermediate tubule identity |
2010-02-10 | Added | DEFINITION | The process by which the loop of Henle of the kidney nephron acquires its identity. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-02-10 | Added | RELATION | is a GO:0072081 (specification of nephron tubule identity) |
2010-02-10 | Added | RELATION | part of GO:0072070 (loop of Henle development) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7776 (Gnathostomata) |
2010-02-28 | Added | SECONDARY | GO:0072083 (specification of intermediate tubule identity) |
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