This term is obsolete.

GO:0072086 JSON

specification of loop of Henle identity

Biological Process

Definition (GO:0072086 GONUTS page)

The process in which the loop of Henle of the kidney nephron acquires its identity.

Secondary IDs

GO:0072083

Acknowledgement

This term was created by the GO Consortium with support from: KRUK image

314 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
specification of intermediate tubule identity exact

Ancestor Chart

Ancestor chart for GO:0072086
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0072086

Child Term Relationship to
GO:0072086
specification of metanephric loop of Henle identity
is_a

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0072086 specification of loop of Henle identity Only in Taxon 7776 Gnathostomata

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A0G2JVK0 10116 A0A0G2JVK0_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2JVK0 10116 A0A0G2JVK0_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K7N2 10116 A0A0G2K7N2_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K7N2 10116 A0A0G2K7N2_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JP87 10116 A6JP87_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JP87 10116 A6JP87_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7FI57 10116 F7FI57_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7FI57 10116 F7FI57_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein O35740 10090 CITE2_MOUSE GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577
NOT-qualified manual protein O35740 10090 CITE2_MOUSE GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0072086 based on ALL annotations
The top 98 of 98 co-occurring terms
Co-occurring Term PR S% #Together #Compared
specification of loop of Henle identity
641,277.90 100.00 309 309
proximal/distal pattern formation involved in metanephric nephron development
641,277.90 50.81 157 157
proximal/distal pattern formation involved in nephron development
641,277.90 26.86 83 83
His-Purkinje system cell differentiation
641,277.90 26.21 81 81
glial cell fate commitment
574,651.56 21.77 69 77
Purkinje myocyte development
309,187.53 20.45 81 168
negative regulation of inner ear receptor cell differentiation
276,551.06 17.25 69 160
atrioventricular bundle cell differentiation
205,310.31 16.84 81 253
metanephric nephron tubule morphogenesis
178,420.05 14.14 69 248
comma-shaped body morphogenesis
162,081.22 13.45 69 273
Totals 8062 128646363
No co-occurrence statistics for GO:0072086 based on MANUAL annotations
The top 88 of 88 co-occurring terms
Co-occurring Term PR S% #Together #Compared
specification of loop of Henle identity
108,579.45 100.00 13 13
proximal/distal pattern formation involved in metanephric nephron development
108,579.46 46.15 6 6
proximal/distal pattern formation involved in nephron development
108,579.46 38.46 5 5
His-Purkinje system cell differentiation
81,434.60 21.43 3 4
Purkinje myocyte development
46,534.06 17.65 3 7
atrioventricular bundle cell differentiation
36,193.16 15.79 3 9
negative regulation of inner ear receptor cell differentiation
54,289.73 13.33 2 4
specification of pronephric tubule identity
43,431.79 12.50 2 5
maintenance of kidney identity
43,431.79 12.50 2 5
metanephric nephron tubule morphogenesis
36,193.16 11.76 2 6
Totals 295 820972

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:7776 (Gnathostomata)
2010-12-17 Added DEFINITION The process in which the loop of Henle of the kidney nephron acquires its identity.
2010-12-17 Deleted DEFINITION The process by which the loop of Henle of the kidney nephron acquires its identity.
2010-02-28 Added SECONDARY GO:0072083 (specification of intermediate tubule identity)
2010-02-28 Added SYNONYM specification of intermediate tubule identity
2010-02-10 Added RELATION is a GO:0072081 (specification of nephron tubule identity)
2010-02-10 Added TERM specification of loop of Henle identity
2010-02-10 Added DEFINITION The process by which the loop of Henle of the kidney nephron acquires its identity.
2010-02-10 Added RELATION part of GO:0072070 (loop of Henle development)
Timestamp Action Category Detail
2010-02-10 Added TERM specification of loop of Henle identity
Timestamp Action Category Detail
2010-12-17 Added DEFINITION The process in which the loop of Henle of the kidney nephron acquires its identity.
2010-12-17 Deleted DEFINITION The process by which the loop of Henle of the kidney nephron acquires its identity.
2010-02-28 Added SYNONYM specification of intermediate tubule identity
2010-02-10 Added DEFINITION The process by which the loop of Henle of the kidney nephron acquires its identity.
Timestamp Action Category Detail
2010-02-10 Added RELATION is a GO:0072081 (specification of nephron tubule identity)
2010-02-10 Added RELATION part of GO:0072070 (loop of Henle development)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:7776 (Gnathostomata)
2010-02-28 Added SECONDARY GO:0072083 (specification of intermediate tubule identity)
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