GO:0072116
JSON
pronephros formation
Biological Process
Definition (GO:0072116 GONUTS page)
The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.
Acknowledgement
This term was created by the GO Consortium with support from:
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
pronephric kidney formation | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0072116
Child Term | Relationship to GO:0072116 |
---|---|
head kidney formation
|
is_a |
pronephric nephron tubule formation
|
part_of |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0072116 | pronephros formation | Only in Taxon | 7776 | Gnathostomata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A0G2JVK0 | 10116 | A0A0G2JVK0_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K7N2 | 10116 | A0A0G2K7N2_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JP87 | 10116 | A6JP87_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F7FI57 | 10116 | F7FI57_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O35740 | 10090 | CITE2_MOUSE | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | P97769 | 10090 | CITE1_MOUSE | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | Q4LDQ3 | 8364 | IRX5_XENTR | GO:0048793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q4V8P1 | 10116 | Q4V8P1_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q90XW5 | 8355 | IRX5_XENLA | GO:0048793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:18715948 | |
NOT-qualified manual | protein | Q90XW6 | 8355 | IRX4A_XENLA | GO:0048793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:18715948 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0072116 based on ALL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
pronephros formation
|
3,544,341.50 | 100.00 | 55 | 55 |
camera-type eye photoreceptor cell development
|
1,288,851.40 | 35.62 | 52 | 143 |
pigment granule aggregation in cell center
|
708,868.30 | 19.77 | 52 | 260 |
Kupffer's vesicle development
|
85,963.51 | 2.42 | 52 | 2,144 |
melanosome transport
|
67,289.44 | 1.90 | 52 | 2,739 |
gastrulation
|
45,084.58 | 1.27 | 52 | 4,088 |
heart looping
|
24,181.23 | 0.68 | 54 | 7,915 |
camera-type eye development
|
20,122.91 | 0.57 | 52 | 9,159 |
pronephric nephron tubule development
|
22,720.14 | 0.48 | 1 | 156 |
BBSome
|
12,807.02 | 0.36 | 52 | 14,391 |
Totals | 1040 | 157017814 |
No co-occurrence statistics for GO:0072116 based on MANUAL annotations
The top 28 of 28 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
pronephros formation
|
322,949.75 | 100.00 | 4 | 4 |
camera-type eye photoreceptor cell development
|
53,824.96 | 11.11 | 1 | 6 |
pigment granule aggregation in cell center
|
26,912.48 | 6.67 | 1 | 12 |
pronephric nephron tubule development
|
20,184.36 | 5.26 | 1 | 16 |
opsin transport
|
12,421.15 | 3.45 | 1 | 26 |
cloaca development
|
11,533.92 | 3.23 | 1 | 28 |
renal tubule development
|
7,176.66 | 2.08 | 1 | 45 |
pronephros morphogenesis
|
6,871.27 | 2.00 | 1 | 47 |
body morphogenesis
|
5,473.72 | 1.61 | 1 | 59 |
protein localization to ciliary inversin compartment
|
2,935.91 | 0.88 | 1 | 110 |
Totals | 35 | 17076 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7776 (Gnathostomata) |
2014-11-22 | Added | RELATION | is a GO:0048645 (animal organ formation) |
2010-10-07 | Added | SYNONYM | pronephric kidney formation |
2010-02-24 | Added | TERM | pronephros formation |
2010-02-24 | Added | RELATION | part of GO:0072114 (pronephros morphogenesis) |
2010-02-24 | Added | RELATION | is a GO:0072003 (kidney rudiment formation) |
2010-02-24 | Added | DEFINITION | The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-02-24 | Added | TERM | pronephros formation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-10-07 | Added | SYNONYM | pronephric kidney formation |
2010-02-24 | Added | DEFINITION | The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-11-22 | Added | RELATION | is a GO:0048645 (animal organ formation) |
2010-02-24 | Added | RELATION | part of GO:0072114 (pronephros morphogenesis) |
2010-02-24 | Added | RELATION | is a GO:0072003 (kidney rudiment formation) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7776 (Gnathostomata) |
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