This term is obsolete.

GO:0072116 JSON

pronephros formation

Biological Process

Definition (GO:0072116 GONUTS page)

The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.

Acknowledgement

This term was created by the GO Consortium with support from: KRUK image

55 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
pronephric kidney formation exact

Ancestor Chart

Ancestor chart for GO:0072116
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0072116

Child Term Relationship to
GO:0072116
head kidney formation
is_a
pronephric nephron tubule formation
part_of

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0072116 pronephros formation Only in Taxon 7776 Gnathostomata

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A0G2JVK0 10116 A0A0G2JVK0_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K7N2 10116 A0A0G2K7N2_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JP87 10116 A6JP87_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7FI57 10116 F7FI57_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein O35740 10090 CITE2_MOUSE GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577
NOT-qualified manual protein P97769 10090 CITE1_MOUSE GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577
NOT-qualified manual protein Q4LDQ3 8364 IRX5_XENTR GO:0048793 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q4V8P1 10116 Q4V8P1_RAT GO:0001822 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q90XW5 8355 IRX5_XENLA GO:0048793 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:18715948
NOT-qualified manual protein Q90XW6 8355 IRX4A_XENLA GO:0048793 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:18715948

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0072116 based on ALL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term PR S% #Together #Compared
pronephros formation
3,544,341.50 100.00 55 55
camera-type eye photoreceptor cell development
1,288,851.40 35.62 52 143
pigment granule aggregation in cell center
708,868.30 19.77 52 260
Kupffer's vesicle development
85,963.51 2.42 52 2,144
melanosome transport
67,289.44 1.90 52 2,739
gastrulation
45,084.58 1.27 52 4,088
heart looping
24,181.23 0.68 54 7,915
camera-type eye development
20,122.91 0.57 52 9,159
pronephric nephron tubule development
22,720.14 0.48 1 156
BBSome
12,807.02 0.36 52 14,391
Totals 1040 157017814
No co-occurrence statistics for GO:0072116 based on MANUAL annotations
The top 28 of 28 co-occurring terms
Co-occurring Term PR S% #Together #Compared
pronephros formation
322,949.75 100.00 4 4
camera-type eye photoreceptor cell development
53,824.96 11.11 1 6
pigment granule aggregation in cell center
26,912.48 6.67 1 12
pronephric nephron tubule development
20,184.36 5.26 1 16
opsin transport
12,421.15 3.45 1 26
cloaca development
11,533.92 3.23 1 28
renal tubule development
7,176.66 2.08 1 45
pronephros morphogenesis
6,871.27 2.00 1 47
body morphogenesis
5,473.72 1.61 1 59
protein localization to ciliary inversin compartment
2,935.91 0.88 1 110
Totals 35 17076

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:7776 (Gnathostomata)
2014-11-22 Added RELATION is a GO:0048645 (animal organ formation)
2010-10-07 Added SYNONYM pronephric kidney formation
2010-02-24 Added TERM pronephros formation
2010-02-24 Added RELATION part of GO:0072114 (pronephros morphogenesis)
2010-02-24 Added RELATION is a GO:0072003 (kidney rudiment formation)
2010-02-24 Added DEFINITION The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.
Timestamp Action Category Detail
2010-02-24 Added TERM pronephros formation
Timestamp Action Category Detail
2010-10-07 Added SYNONYM pronephric kidney formation
2010-02-24 Added DEFINITION The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.
Timestamp Action Category Detail
2014-11-22 Added RELATION is a GO:0048645 (animal organ formation)
2010-02-24 Added RELATION part of GO:0072114 (pronephros morphogenesis)
2010-02-24 Added RELATION is a GO:0072003 (kidney rudiment formation)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:7776 (Gnathostomata)
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