This term is obsolete.

GO:0097157 JSON

pre-mRNA intronic binding

Molecular Function

Definition (GO:0097157 GONUTS page)

Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA). PMID:16260624

11,124 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
pre-messenger RNA intronic binding exact
pre-mRNA intron binding exact

Ancestor Chart

Ancestor chart for GO:0097157
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0097157

Child Term Relationship to
GO:0097157
pre-mRNA intronic pyrimidine-rich binding
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A0U1RRV7 10116 A0A0U1RRV7_RAT GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5ZSN8 10116 A0A8I5ZSN8_RAT GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2L6 10116 A0A8I6A2L6_RAT GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2P1 10116 A0A8I6A2P1_RAT GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JJT3 10116 A6JJT3_RAT GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein B1WC40 10116 NCBP2_RAT GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P52298 9606 NCBP2_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:7478990
NOT-qualified manual protein P52299 8355 NCBP2_XENLA GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein P84103 9606 SRSF3_HUMAN GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:32440474
NOT-qualified manual protein Q0ZFS8 10116 Q0ZFS8_RAT GO:0036002 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0097157 based on ALL annotations
The top 100 of 702 co-occurring terms
Co-occurring Term PR S% #Together #Compared
pre-mRNA intronic binding
17,856.44 100.00 10,917 10,917
U5 snRNA binding
9,800.22 38.97 6,260 11,406
U12 snRNA binding
17,856.44 35.74 3,902 3,902
U2 snRNA binding
7,651.54 32.49 6,260 14,609
U1 snRNA binding
6,790.11 29.64 6,261 16,465
U6 snRNA binding
3,154.46 15.61 6,260 35,436
U12-type spliceosomal complex
3,158.94 12.69 3,383 19,123
U5 snRNP
2,495.10 12.66 6,258 44,786
catalytic step 2 spliceosome
762.47 4.14 6,260 146,604
spliceosomal tri-snRNP complex assembly
659.84 3.60 6,258 169,352
Totals 90576 1537280
No co-occurrence statistics for GO:0097157 based on MANUAL annotations
The top 100 of 534 co-occurring terms
Co-occurring Term PR S% #Together #Compared
pre-mRNA intronic binding
4,663.53 100.00 277 277
U12 snRNA binding
4,663.53 34.30 95 95
U5 snRNA binding
2,302.98 30.00 120 243
spliceosomal tri-snRNP complex assembly
1,381.79 21.35 120 405
U2 snRNA binding
1,216.57 19.45 120 460
U1 snRNA binding
1,070.03 17.65 120 523
U6 snRNA binding
1,008.33 16.85 120 555
U12-type spliceosomal complex
589.93 10.18 95 751
U5 snRNP
406.41 7.82 120 1,377
mRNA CDS binding
1,732.17 4.35 13 35
Totals 1967 18885

Change Log

Timestamp Action Category Detail
2024-01-15 Added SYNONYM pre-mRNA intron binding
2021-05-24 Added DEFINITION Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA).
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA).
2011-09-25 Added RELATION is a GO:0036002 (pre-mRNA binding)
2011-09-25 Added SYNONYM pre-messenger RNA intronic binding
2011-09-25 Added TERM pre-mRNA intronic binding
2011-09-25 Added DEFINITION Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA).
Timestamp Action Category Detail
2011-09-25 Added TERM pre-mRNA intronic binding
Timestamp Action Category Detail
2024-01-15 Added SYNONYM pre-mRNA intron binding
2021-05-24 Added DEFINITION Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA).
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA).
2011-09-25 Added SYNONYM pre-messenger RNA intronic binding
2011-09-25 Added DEFINITION Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA).
Timestamp Action Category Detail
2011-09-25 Added RELATION is a GO:0036002 (pre-mRNA binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
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