GO:0097157
JSON
pre-mRNA intronic binding
Molecular Function
Definition (GO:0097157 GONUTS page)
Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA). PMID:16260624
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
pre-messenger RNA intronic binding | exact |
pre-mRNA intron binding | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0097157
Child Term | Relationship to GO:0097157 |
---|---|
pre-mRNA intronic pyrimidine-rich binding
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A0U1RRV7 | 10116 | A0A0U1RRV7_RAT | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5ZSN8 | 10116 | A0A8I5ZSN8_RAT | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A2L6 | 10116 | A0A8I6A2L6_RAT | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A2P1 | 10116 | A0A8I6A2P1_RAT | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JJT3 | 10116 | A6JJT3_RAT | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | B1WC40 | 10116 | NCBP2_RAT | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P52298 | 9606 | NCBP2_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:7478990 | |
NOT-qualified manual | protein | P52299 | 8355 | NCBP2_XENLA | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | P84103 | 9606 | SRSF3_HUMAN | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:32440474 | |
NOT-qualified manual | protein | Q0ZFS8 | 10116 | Q0ZFS8_RAT | GO:0036002 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0097157 based on ALL annotations
The top 100 of 702 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
pre-mRNA intronic binding
|
17,856.44 | 100.00 | 10,917 | 10,917 |
U5 snRNA binding
|
9,800.22 | 38.97 | 6,260 | 11,406 |
U12 snRNA binding
|
17,856.44 | 35.74 | 3,902 | 3,902 |
U2 snRNA binding
|
7,651.54 | 32.49 | 6,260 | 14,609 |
U1 snRNA binding
|
6,790.11 | 29.64 | 6,261 | 16,465 |
U6 snRNA binding
|
3,154.46 | 15.61 | 6,260 | 35,436 |
U12-type spliceosomal complex
|
3,158.94 | 12.69 | 3,383 | 19,123 |
U5 snRNP
|
2,495.10 | 12.66 | 6,258 | 44,786 |
catalytic step 2 spliceosome
|
762.47 | 4.14 | 6,260 | 146,604 |
spliceosomal tri-snRNP complex assembly
|
659.84 | 3.60 | 6,258 | 169,352 |
Totals | 90576 | 1537280 |
No co-occurrence statistics for GO:0097157 based on MANUAL annotations
The top 100 of 534 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
pre-mRNA intronic binding
|
4,663.53 | 100.00 | 277 | 277 |
U12 snRNA binding
|
4,663.53 | 34.30 | 95 | 95 |
U5 snRNA binding
|
2,302.98 | 30.00 | 120 | 243 |
spliceosomal tri-snRNP complex assembly
|
1,381.79 | 21.35 | 120 | 405 |
U2 snRNA binding
|
1,216.57 | 19.45 | 120 | 460 |
U1 snRNA binding
|
1,070.03 | 17.65 | 120 | 523 |
U6 snRNA binding
|
1,008.33 | 16.85 | 120 | 555 |
U12-type spliceosomal complex
|
589.93 | 10.18 | 95 | 751 |
U5 snRNP
|
406.41 | 7.82 | 120 | 1,377 |
mRNA CDS binding
|
1,732.17 | 4.35 | 13 | 35 |
Totals | 1967 | 18885 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-01-15 | Added | SYNONYM | pre-mRNA intron binding |
2021-05-24 | Added | DEFINITION | Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA). |
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA). |
2011-09-25 | Added | RELATION | is a GO:0036002 (pre-mRNA binding) |
2011-09-25 | Added | SYNONYM | pre-messenger RNA intronic binding |
2011-09-25 | Added | TERM | pre-mRNA intronic binding |
2011-09-25 | Added | DEFINITION | Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA). |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-09-25 | Added | TERM | pre-mRNA intronic binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-01-15 | Added | SYNONYM | pre-mRNA intron binding |
2021-05-24 | Added | DEFINITION | Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA). |
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA). |
2011-09-25 | Added | SYNONYM | pre-messenger RNA intronic binding |
2011-09-25 | Added | DEFINITION | Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA). |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-09-25 | Added | RELATION | is a GO:0036002 (pre-mRNA binding) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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