GO:0097165
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nuclear stress granule
Cellular Component
Definition (GO:0097165 GONUTS page)
A dense aggregation in the nucleus composed of proteins and RNAs that appear when the cell is under stress. PMID:10359787 PMID:12865437
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0097165 | nuclear stress granule | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JW23 | 10116 | A0A0G2JW23_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K8T1 | 10116 | A0A0G2K8T1_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1B0GR71 | 10090 | A0A1B0GR71_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1B0GRK6 | 10090 | A0A1B0GRK6_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1D8PHF8 | 237561 | A0A1D8PHF8_CANAL | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y8H4 | 10116 | A0A8I5Y8H4_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A0E5 | 10116 | A0A8I6A0E5_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0097165 based on ALL annotations
The top 100 of 341 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nuclear stress granule
|
272,260.88 | 100.00 | 716 | 716 |
protein localization to cytoplasmic stress granule
|
79,342.30 | 16.49 | 197 | 676 |
regulatory region RNA binding
|
210,282.80 | 12.77 | 95 | 123 |
desmosome maintenance
|
158,959.77 | 12.01 | 94 | 161 |
triplex DNA binding
|
112,860.28 | 11.37 | 97 | 234 |
positive regulation of cap-dependent translational initiation
|
100,465.26 | 11.27 | 100 | 271 |
negative regulation of mRNA catabolic process
|
95,921.09 | 11.02 | 99 | 281 |
cellular response to diamide
|
139,533.70 | 10.33 | 82 | 160 |
perichromatin fibrils
|
71,184.11 | 9.80 | 97 | 371 |
positive regulation of RNA export from nucleus
|
63,180.15 | 9.35 | 97 | 418 |
Totals | 7872 | 305126 |
No co-occurrence statistics for GO:0097165 based on MANUAL annotations
The top 100 of 309 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nuclear stress granule
|
15,948.14 | 100.00 | 81 | 81 |
protein localization to cytoplasmic stress granule
|
6,478.93 | 13.00 | 13 | 32 |
3'-5' DNA/RNA helicase activity
|
9,814.24 | 9.30 | 8 | 13 |
triplex DNA binding
|
9,814.24 | 9.30 | 8 | 13 |
cellular response to diamide
|
9,814.24 | 9.30 | 8 | 13 |
negative regulation of action potential
|
9,113.22 | 9.20 | 8 | 14 |
positive regulation of epithelial cell apoptotic process
|
5,799.32 | 8.42 | 8 | 22 |
cellular response to cadmium ion
|
1,708.73 | 8.20 | 21 | 196 |
RISC complex binding
|
5,103.40 | 8.16 | 8 | 25 |
cellular response to sodium arsenite
|
4,907.12 | 8.08 | 8 | 26 |
Totals | 738 | 10972 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2019-09-12 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2019-09-12 | Added | RELATION | part of GO:0005634 (nucleus) |
2012-08-11 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2011-09-30 | Added | TERM | nuclear stress granule |
2011-09-30 | Added | RELATION | is a GO:0035770 (ribonucleoprotein granule) |
2011-09-30 | Added | DEFINITION | A dense aggregation in the nucleus composed of proteins and RNAs that appear when the cell is under stress. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-09-30 | Added | TERM | nuclear stress granule |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-09-30 | Added | DEFINITION | A dense aggregation in the nucleus composed of proteins and RNAs that appear when the cell is under stress. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-09-12 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2019-09-12 | Added | RELATION | part of GO:0005634 (nucleus) |
2012-08-11 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2011-09-30 | Added | RELATION | is a GO:0035770 (ribonucleoprotein granule) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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