This term is obsolete.

GO:0097422 JSON

tubular endosome

Cellular Component

Definition (GO:0097422 GONUTS page)

A network of fine tubules in the vicinity of the Golgi complex and around the centriole. PMID:11896161

3,744 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
coated tip related

Ancestor Chart

Ancestor chart for GO:0097422
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0097422 tubular endosome Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0D1E8X3 237631 A0A0D1E8X3_USTMA GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A0G2JZ79 10116 SIR1_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1D8PHF8 237561 A0A1D8PHF8_CANAL GO:0031410 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936
NOT-qualified manual protein A0A1L8G9S0 8355 A0A1L8G9S0_XENLA GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A1S4L3K3 6945 A0A1S4L3K3_IXOSC GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A2K5ATM2 6239 A0A2K5ATM2_CAEEL GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2K5ATM9 6239 A0A2K5ATM9_CAEEL GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033

Cross-references

Database ID Description
NIF_Subcellular sao1570660411
NIF_Subcellular sao694815499

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0097422 based on ALL annotations
The top 100 of 168 co-occurring terms
Co-occurring Term PR S% #Together #Compared
tubular endosome
52,416.99 100.00 3,719 3,719
early endosome to late endosome transport
11,660.88 21.76 3,377 15,180
transport vesicle
8,552.97 16.05 3,377 20,696
neuron projection morphogenesis
2,323.51 4.20 1,666 37,584
late endosome
1,697.88 3.23 3,470 107,126
neurotransmitter receptor transport, endosome to plasma membrane
51,892.82 2.66 99 100
negative regulation of late endosome to lysosome transport
51,892.82 2.66 99 100
regulation of dendritic spine maintenance
25,190.69 2.59 99 206
mitochondrion-derived vesicle
20,035.84 2.55 99 259
mitochondrion to lysosome vesicle-mediated transport
19,582.20 2.55 99 265
Totals 39907 30748555
No co-occurrence statistics for GO:0097422 based on MANUAL annotations
The top 100 of 112 co-occurring terms
Co-occurring Term PR S% #Together #Compared
tubular endosome
18,194.35 100.00 71 71
early endosome to late endosome transport
3,320.14 16.95 50 274
transport vesicle
2,944.07 15.15 50 309
neurotransmitter receptor transport, endosome to plasma membrane
15,920.06 9.72 7 8
retromer, cargo-selective complex
6,931.18 9.52 8 21
negative regulation of late endosome to lysosome transport
15,595.16 8.33 6 7
negative regulation of protein homooligomerization
12,129.57 8.11 6 9
positive regulation of dopamine biosynthetic process
12,129.57 8.11 6 9
mitochondrion-derived vesicle
10,916.61 8.00 6 10
mitochondrion to lysosome vesicle-mediated transport
10,916.61 8.00 6 10
Totals 1003 239697

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2019-09-12 Added RELATION part of GO:0005768 (endosome)
2019-09-12 Deleted RELATION is a GO:0044440 (obsolete endosomal part)
2019-09-12 Added RELATION is a GO:0110165 (cellular anatomical structure)
2014-10-05 Added XREF NIF_Subcellular:sao1570660411
2013-10-17 Added XREF NIF_Subcellular:sao694815499
2012-11-09 Added RELATION is a GO:0044440 (obsolete endosomal part)
2012-11-09 Added SYNONYM coated tip
2012-11-09 Added DEFINITION A network of fine tubules in the vicinity of the Golgi complex and around the centriole.
2012-11-09 Added TERM tubular endosome
Timestamp Action Category Detail
2012-11-09 Added TERM tubular endosome
Timestamp Action Category Detail
2012-11-09 Added SYNONYM coated tip
2012-11-09 Added DEFINITION A network of fine tubules in the vicinity of the Golgi complex and around the centriole.
Timestamp Action Category Detail
2019-09-12 Added RELATION part of GO:0005768 (endosome)
2019-09-12 Deleted RELATION is a GO:0044440 (obsolete endosomal part)
2019-09-12 Added RELATION is a GO:0110165 (cellular anatomical structure)
2012-11-09 Added RELATION is a GO:0044440 (obsolete endosomal part)
Timestamp Action Category Detail
2014-10-05 Added XREF NIF_Subcellular:sao1570660411
2013-10-17 Added XREF NIF_Subcellular:sao694815499
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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