This term is obsolete.
In mammals, ciliary transition fibers comprise at least five components (Ccdc41/Cep83, Cep89/Cep123, Sclt1, Fbf1, and Cep164) (PMID:24469809).

GO:0097539 JSON

ciliary transition fiber

Cellular Component

Definition (GO:0097539 GONUTS page)

A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium). PMID:22653444 PMID:24231678 PMID:5064817 PMID:5335827

Comments

In mammals, ciliary transition fibers comprise at least five components (Ccdc41/Cep83, Cep89/Cep123, Sclt1, Fbf1, and Cep164) (PMID:24469809).

7,087 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
cilial transition fiber exact
transition fibre broad
transition fiber broad
centriolar distal appendage related
distal appendage of centriole related
cilial transition fibre exact
distal appendage of basal body related
cilium transition fiber exact
cilium transition fibre exact
ciliary transition fibre exact

Ancestor Chart

Ancestor chart for GO:0097539
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0097539 ciliary transition fiber Never in Taxon 3176 Zygnematales
GO:0097539 ciliary transition fiber Never in Taxon 3312 Coniferophyta
GO:0097539 ciliary transition fiber Never in Taxon 3378 Gnetales
GO:0097539 ciliary transition fiber Never in Taxon 3398 Magnoliopsida
GO:0097539 ciliary transition fiber Never in Taxon 4890 Ascomycota
GO:0097539 ciliary transition fiber Never in Taxon 5782 Dictyostelium
GO:0097539 ciliary transition fiber Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I6ACB6 10116 A0A8I6ACB6_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6G6V6 10116 A0A8I6G6V6_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6GF94 10116 A0A8I6GF94_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8J8YB99 10116 A0A8J8YB99_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A1ZB91 7227 DAAF3_DROME GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:34553759
NOT-qualified manual protein A6IQI5 10116 A6IQI5_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein B1WC73 10116 B1WC73_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F1M3J4 10116 MRP4_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein O08697 10116 ARL2_RAT GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P36404 9606 ARL2_HUMAN GO:0005929 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17646400

Cross-references

Database ID Description
InterPro IPR033561 Fas-binding factor 1

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0097539 based on ALL annotations
The top 100 of 199 co-occurring terms
Co-occurring Term PR S% #Together #Compared
ciliary transition fiber
27,824.55 100.00 7,006 7,006
centrosome-templated microtubule nucleation
12,468.37 18.21 1,645 3,671
pericentriolar material
6,431.28 13.18 1,645 7,117
establishment of epithelial cell polarity
6,015.84 13.03 1,729 7,997
microtubule anchoring at centrosome
5,591.42 12.14 1,645 8,186
centrosome localization
4,161.41 10.06 1,645 10,999
mitotic spindle pole
3,345.62 8.64 1,645 13,681
centriole
1,936.13 6.94 6,794 97,638
establishment of centrosome localization
3,260.97 6.55 905 7,722
cilium assembly
846.48 3.01 5,169 169,910
Totals 53188 9709543
No co-occurrence statistics for GO:0097539 based on MANUAL annotations
The top 100 of 134 co-occurring terms
Co-occurring Term PR S% #Together #Compared
ciliary transition fiber
10,502.43 100.00 123 123
centrosome-templated microtubule nucleation
7,605.21 16.03 21 29
establishment of centrosome localization
2,273.72 10.55 21 97
regulation of striated muscle tissue development
3,029.55 9.38 15 52
pronucleus
2,070.90 7.78 14 71
microtubule anchoring at centrosome
1,173.14 7.24 21 188
pericentriolar material
1,030.61 6.65 21 214
centrosome localization
889.32 6.00 21 248
BBSome binding
4,901.14 5.34 7 15
centriole
559.27 5.27 104 1,953
Totals 1047 75225

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3378 (Gnetales)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3312 (Coniferophyta)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3176 (Zygnematales)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:5782 (Dictyostelium)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:4890 (Ascomycota)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3398 (Magnoliopsida)
2022-06-22 Deleted RELATION is a GO:0032991 (protein-containing complex)
2022-06-22 Added RELATION is a GO:0140535 (intracellular protein-containing complex)
2019-09-12 Deleted RELATION is a GO:0044441 (obsolete ciliary part)
Timestamp Action Category Detail
2013-12-05 Added TERM ciliary transition fiber
Timestamp Action Category Detail
2015-02-07 Added SYNONYM distal appendage of mother centriole
2015-02-07 Added SYNONYM centriolar distal appendage
2015-02-07 Added SYNONYM distal appendage of centriole
2015-02-07 Added SYNONYM distal appendage of basal body
2013-12-07 Added SYNONYM cilial transition fiber
2013-12-07 Added SYNONYM cilial transition fibre
2013-12-05 Added SYNONYM cilium transition fibre
2013-12-05 Added SYNONYM ciliary transition fibre
2013-12-05 Added SYNONYM transition fibre
2013-12-05 Added SYNONYM cilium transition fiber
2013-12-05 Added SYNONYM transition fiber
2013-12-05 Added DEFINITION A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).
Timestamp Action Category Detail
2022-06-22 Deleted RELATION is a GO:0032991 (protein-containing complex)
2022-06-22 Added RELATION is a GO:0140535 (intracellular protein-containing complex)
2019-09-12 Deleted RELATION is a GO:0044441 (obsolete ciliary part)
2019-09-12 Added RELATION part of GO:0005929 (cilium)
2018-02-18 Deleted RELATION is a GO:0043234 (protein complex)
2018-02-18 Added RELATION is a GO:0032991 (protein-containing complex)
2016-06-03 Added RELATION has part GO:0097546 (ciliary base)
2013-12-05 Added RELATION is a GO:0044441 (obsolete ciliary part)
2013-12-05 Added RELATION is a GO:0043234 (protein complex)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3378 (Gnetales)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3312 (Coniferophyta)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3176 (Zygnematales)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:5782 (Dictyostelium)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:4890 (Ascomycota)
2023-11-01 Added CONSTRAINT never_in_taxon NCBITaxon:3398 (Magnoliopsida)
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