In mammals, ciliary transition fibers comprise at least five components (Ccdc41/Cep83, Cep89/Cep123, Sclt1, Fbf1, and Cep164) (PMID:24469809).
GO:0097539
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ciliary transition fiber
Cellular Component
Definition (GO:0097539 GONUTS page)
A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium). PMID:22653444 PMID:24231678 PMID:5064817 PMID:5335827
Comments
In mammals, ciliary transition fibers comprise at least five components (Ccdc41/Cep83, Cep89/Cep123, Sclt1, Fbf1, and Cep164) (PMID:24469809).
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
cilial transition fiber | exact |
transition fibre | broad |
transition fiber | broad |
centriolar distal appendage | related |
distal appendage of centriole | related |
cilial transition fibre | exact |
distal appendage of basal body | related |
cilium transition fiber | exact |
cilium transition fibre | exact |
ciliary transition fibre | exact |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0097539 | ciliary transition fiber | Never in Taxon | 3176 | Zygnematales | |
GO:0097539 | ciliary transition fiber | Never in Taxon | 3312 | Coniferophyta | |
GO:0097539 | ciliary transition fiber | Never in Taxon | 3378 | Gnetales | |
GO:0097539 | ciliary transition fiber | Never in Taxon | 3398 | Magnoliopsida | |
GO:0097539 | ciliary transition fiber | Never in Taxon | 4890 | Ascomycota | |
GO:0097539 | ciliary transition fiber | Never in Taxon | 5782 | Dictyostelium | |
GO:0097539 | ciliary transition fiber | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I6ACB6 | 10116 | A0A8I6ACB6_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6G6V6 | 10116 | A0A8I6G6V6_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6GF94 | 10116 | A0A8I6GF94_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8J8YB99 | 10116 | A0A8J8YB99_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A1ZB91 | 7227 | DAAF3_DROME | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:34553759 | |
NOT-qualified manual | protein | A6IQI5 | 10116 | A6IQI5_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | B1WC73 | 10116 | B1WC73_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F1M3J4 | 10116 | MRP4_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O08697 | 10116 | ARL2_RAT | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P36404 | 9606 | ARL2_HUMAN | GO:0005929 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17646400 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR033561 | Fas-binding factor 1 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0097539 based on ALL annotations
The top 100 of 199 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
ciliary transition fiber
|
27,824.55 | 100.00 | 7,006 | 7,006 |
centrosome-templated microtubule nucleation
|
12,468.37 | 18.21 | 1,645 | 3,671 |
pericentriolar material
|
6,431.28 | 13.18 | 1,645 | 7,117 |
establishment of epithelial cell polarity
|
6,015.84 | 13.03 | 1,729 | 7,997 |
microtubule anchoring at centrosome
|
5,591.42 | 12.14 | 1,645 | 8,186 |
centrosome localization
|
4,161.41 | 10.06 | 1,645 | 10,999 |
mitotic spindle pole
|
3,345.62 | 8.64 | 1,645 | 13,681 |
centriole
|
1,936.13 | 6.94 | 6,794 | 97,638 |
establishment of centrosome localization
|
3,260.97 | 6.55 | 905 | 7,722 |
cilium assembly
|
846.48 | 3.01 | 5,169 | 169,910 |
Totals | 53188 | 9709543 |
No co-occurrence statistics for GO:0097539 based on MANUAL annotations
The top 100 of 134 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
ciliary transition fiber
|
10,502.43 | 100.00 | 123 | 123 |
centrosome-templated microtubule nucleation
|
7,605.21 | 16.03 | 21 | 29 |
establishment of centrosome localization
|
2,273.72 | 10.55 | 21 | 97 |
regulation of striated muscle tissue development
|
3,029.55 | 9.38 | 15 | 52 |
pronucleus
|
2,070.90 | 7.78 | 14 | 71 |
microtubule anchoring at centrosome
|
1,173.14 | 7.24 | 21 | 188 |
pericentriolar material
|
1,030.61 | 6.65 | 21 | 214 |
centrosome localization
|
889.32 | 6.00 | 21 | 248 |
BBSome binding
|
4,901.14 | 5.34 | 7 | 15 |
centriole
|
559.27 | 5.27 | 104 | 1,953 |
Totals | 1047 | 75225 |
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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- Cross-references
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3378 (Gnetales) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3312 (Coniferophyta) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3176 (Zygnematales) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:5782 (Dictyostelium) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4890 (Ascomycota) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3398 (Magnoliopsida) |
2022-06-22 | Deleted | RELATION | is a GO:0032991 (protein-containing complex) |
2022-06-22 | Added | RELATION | is a GO:0140535 (intracellular protein-containing complex) |
2019-09-12 | Deleted | RELATION | is a GO:0044441 (obsolete ciliary part) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-12-05 | Added | TERM | ciliary transition fiber |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-02-07 | Added | SYNONYM | distal appendage of mother centriole |
2015-02-07 | Added | SYNONYM | centriolar distal appendage |
2015-02-07 | Added | SYNONYM | distal appendage of centriole |
2015-02-07 | Added | SYNONYM | distal appendage of basal body |
2013-12-07 | Added | SYNONYM | cilial transition fiber |
2013-12-07 | Added | SYNONYM | cilial transition fibre |
2013-12-05 | Added | SYNONYM | cilium transition fibre |
2013-12-05 | Added | SYNONYM | ciliary transition fibre |
2013-12-05 | Added | SYNONYM | transition fibre |
2013-12-05 | Added | SYNONYM | cilium transition fiber |
2013-12-05 | Added | SYNONYM | transition fiber |
2013-12-05 | Added | DEFINITION | A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium). |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-22 | Deleted | RELATION | is a GO:0032991 (protein-containing complex) |
2022-06-22 | Added | RELATION | is a GO:0140535 (intracellular protein-containing complex) |
2019-09-12 | Deleted | RELATION | is a GO:0044441 (obsolete ciliary part) |
2019-09-12 | Added | RELATION | part of GO:0005929 (cilium) |
2018-02-18 | Deleted | RELATION | is a GO:0043234 (protein complex) |
2018-02-18 | Added | RELATION | is a GO:0032991 (protein-containing complex) |
2016-06-03 | Added | RELATION | has part GO:0097546 (ciliary base) |
2013-12-05 | Added | RELATION | is a GO:0044441 (obsolete ciliary part) |
2013-12-05 | Added | RELATION | is a GO:0043234 (protein complex) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3378 (Gnetales) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3312 (Coniferophyta) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3176 (Zygnematales) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:5782 (Dictyostelium) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4890 (Ascomycota) |
2023-11-01 | Added | CONSTRAINT | never_in_taxon NCBITaxon:3398 (Magnoliopsida) |
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