This term is obsolete.

GO:0097629 JSON

extrinsic component of omegasome membrane

Cellular Component

Definition (GO:0097629 GONUTS page)

The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region. PMID:18725538 PMID:24591649

1,552 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
omegasome peripheral membrane related
extrinsic to omegasome membrane exact

Ancestor Chart

Ancestor chart for GO:0097629
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Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Discerning the appropriate spatial relationship between a membrane and a gene product Link

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0097629 extrinsic component of omegasome membrane Only in Taxon 131567 cellular organisms

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein O63264 4957 ZBI1_ZYGBI GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03879 559292 MBI4_YEAST GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03880 162425 ANI1_EMEND GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03882 559292 SCE1_YEAST GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein Q0H8X2 237631 BI1_USTMA GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein Q35127 367110 MBI1_NEUCR GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
NOT-qualified manual protein A0A8I6ARU6 10116 A0A8I6ARU6_RAT GO:0016020 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6HKS9 10116 A6HKS9_RAT GO:0016020 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6HKT1 10116 A6HKT1_RAT GO:0016020 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7EZK6 10116 F7EZK6_RAT GO:0016020 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0097629 based on ALL annotations
The top 80 of 80 co-occurring terms
Co-occurring Term PR S% #Together #Compared
extrinsic component of omegasome membrane
126,748.23 100.00 1,538 1,538
extrinsic component of phagophore assembly site membrane
120,147.63 88.93 1,438 1,517
phosphatidylinositol 3-kinase complex, class III
96,232.29 72.12 1,438 1,894
autophagosome membrane docking
92,361.67 69.32 1,437 1,972
phosphatidylinositol 3-kinase regulator activity
37,061.04 28.61 1,431 4,894
omegasome
85,640.70 6.31 100 148
response to mitochondrial depolarisation
22,285.40 4.83 96 546
positive regulation by host of viral genome replication
14,721.05 4.35 100 861
protein-membrane adaptor activity
4,955.25 3.90 1,438 36,782
mitophagy
4,695.23 3.69 1,437 38,792
Totals 21122 187039334
No co-occurrence statistics for GO:0097629 based on MANUAL annotations
The top 61 of 61 co-occurring terms
Co-occurring Term PR S% #Together #Compared
extrinsic component of omegasome membrane
41,670.93 100.00 31 31
extrinsic component of phagophore assembly site membrane
38,892.87 84.85 28 30
autophagosome membrane docking
22,878.16 51.85 28 51
phosphatidylinositol 3-kinase complex, class III
22,438.20 50.91 28 52
phosphatidylinositol 3-kinase regulator activity
12,964.29 30.11 28 90
omegasome
10,417.73 7.50 3 12
positive regulation by host of viral genome replication
4,808.18 5.56 3 26
response to mitochondrial depolarisation
3,086.74 3.57 2 27
phosphatidylinositol 3-kinase inhibitor activity
2,525.51 3.23 2 33
cellular response to starvation
944.99 2.27 31 1,367
Totals 418 659666

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2016-06-26 Deleted RELATION is a GO:0044444 (obsolete cytoplasmic part)
2014-09-18 Added RELATION is a GO:0044444 (obsolete cytoplasmic part)
2014-08-24 Added SYNONYM omegasome peripheral membrane
2014-08-24 Added DEFINITION The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
2014-08-24 Added RELATION part of GO:1903349 (omegasome membrane)
2014-08-24 Added RELATION is a GO:0031312 (extrinsic component of organelle membrane)
2014-08-24 Added TERM extrinsic component of omegasome membrane
2014-08-24 Added SYNONYM extrinsic to omegasome membrane
Timestamp Action Category Detail
2014-08-24 Added TERM extrinsic component of omegasome membrane
Timestamp Action Category Detail
2014-08-24 Added SYNONYM omegasome peripheral membrane
2014-08-24 Added DEFINITION The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
2014-08-24 Added SYNONYM extrinsic to omegasome membrane
Timestamp Action Category Detail
2016-06-26 Deleted RELATION is a GO:0044444 (obsolete cytoplasmic part)
2014-09-18 Added RELATION is a GO:0044444 (obsolete cytoplasmic part)
2014-08-24 Added RELATION part of GO:1903349 (omegasome membrane)
2014-08-24 Added RELATION is a GO:0031312 (extrinsic component of organelle membrane)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
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