This term is obsolete.

GO:0098554 JSON

cytoplasmic side of endoplasmic reticulum membrane

Cellular Component

Definition (GO:0098554 GONUTS page)

The side (leaflet) of the plasma membrane that faces the cytoplasm.

13,961 annotations

Ancestor Chart

Ancestor chart for GO:0098554
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0098554

Child Term Relationship to
GO:0098554
cytoplasmic side of smooth endoplasmic reticulum membrane
is_a
cytoplasmic side of rough endoplasmic reticulum membrane
is_a

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0098554 cytoplasmic side of endoplasmic reticulum membrane Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein O63264 4957 ZBI1_ZYGBI GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03879 559292 MBI4_YEAST GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03880 162425 ANI1_EMEND GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03882 559292 SCE1_YEAST GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein Q0H8X2 237631 BI1_USTMA GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein Q35127 367110 MBI1_NEUCR GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0D1E8X3 237631 A0A0D1E8X3_USTMA GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A0G2JZ79 10116 SIR1_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0071458 obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane replaced_by GO:0098554

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0098554 based on ALL annotations
The top 100 of 578 co-occurring terms
Co-occurring Term PR S% #Together #Compared
cytoplasmic side of endoplasmic reticulum membrane
14,351.68 100.00 13,583 13,583
membrane protein proteolysis
13,588.49 88.80 12,695 13,408
aspartic endopeptidase activity, intramembrane cleaving
8,872.48 59.43 12,752 20,627
Golgi-associated vesicle membrane
13,618.24 53.76 7,520 7,925
lumenal side of endoplasmic reticulum membrane
3,590.78 24.67 12,846 51,343
organelle membrane
2,720.29 13.91 4,663 24,601
signal peptide processing
564.04 3.80 7,235 184,089
lysosomal membrane
411.56 2.75 5,423 189,107
endosome membrane
291.94 1.90 3,045 149,692
membrane protein intracellular domain proteolysis
339.86 1.01 237 10,008
Totals 97713 3031799
No co-occurrence statistics for GO:0098554 based on MANUAL annotations
The top 100 of 391 co-occurring terms
Co-occurring Term PR S% #Together #Compared
cytoplasmic side of endoplasmic reticulum membrane
2,340.22 100.00 552 552
lumenal side of endoplasmic reticulum membrane
2,104.48 80.89 491 546
aspartic endopeptidase activity, intramembrane cleaving
2,103.18 80.40 488 543
membrane protein proteolysis
2,083.52 79.58 487 547
Golgi-associated vesicle membrane
2,056.36 54.61 326 371
signal peptide processing
491.80 16.40 236 1,123
lysosomal membrane
208.32 8.03 248 2,786
membrane protein intracellular domain proteolysis
363.39 3.63 25 161
membrane protein ectodomain proteolysis
139.64 2.87 29 486
rough endoplasmic reticulum
222.88 2.49 18 189
Totals 3347 33094

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2019-09-12 Deleted RELATION is a GO:0044432 (obsolete endoplasmic reticulum part)
2014-01-16 Deleted RELATION is a GO:0098552 (side of membrane)
2014-01-16 Added RELATION is a GO:0098562 (cytoplasmic side of membrane)
2013-12-12 Added RELATION is a GO:0044432 (obsolete endoplasmic reticulum part)
2013-12-05 Added TERM cytoplasmic side of endoplasmic reticulum membrane
2013-12-05 Added RELATION is a GO:0098552 (side of membrane)
2013-12-05 Added RELATION part of GO:0005789 (endoplasmic reticulum membrane)
2013-12-05 Added DEFINITION The side (leaflet) of the plasma membrane that faces the cytoplasm.
Timestamp Action Category Detail
2013-12-05 Added TERM cytoplasmic side of endoplasmic reticulum membrane
Timestamp Action Category Detail
2013-12-05 Added DEFINITION The side (leaflet) of the plasma membrane that faces the cytoplasm.
Timestamp Action Category Detail
2019-09-12 Deleted RELATION is a GO:0044432 (obsolete endoplasmic reticulum part)
2014-01-16 Deleted RELATION is a GO:0098552 (side of membrane)
2014-01-16 Added RELATION is a GO:0098562 (cytoplasmic side of membrane)
2013-12-12 Added RELATION is a GO:0044432 (obsolete endoplasmic reticulum part)
2013-12-05 Added RELATION is a GO:0098552 (side of membrane)
2013-12-05 Added RELATION part of GO:0005789 (endoplasmic reticulum membrane)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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