GO:0098577
JSON
inactive sex chromosome
Cellular Component
Definition (GO:0098577 GONUTS page)
A sex chromosome that has been inactivated.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
inactivated sex chromosome | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0098577
Child Term | Relationship to GO:0098577 |
---|---|
condensed chromatin of inactivated sex chromosome
|
part_of |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0098577 | inactive sex chromosome | Only in Taxon | 131567 | cellular organisms |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5Y7L4 | 10116 | A0A8I5Y7L4_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q14TE9 | 10116 | Q14TE9_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q63177 | 10116 | Q63177_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q64511 | 10090 | TOP2B_MOUSE | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:11835579 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0098577 based on ALL annotations
The top 100 of 107 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
inactive sex chromosome
|
2,201,720.80 | 100.00 | 90 | 90 |
RNA localization to chromatin
|
2,078,028.50 | 88.42 | 84 | 89 |
poly(C) RNA binding
|
1,845,251.50 | 82.24 | 88 | 105 |
protein localization to spindle microtubule
|
1,291,676.10 | 57.89 | 88 | 150 |
dendritic transport of messenger ribonucleoprotein complex
|
1,163,173.20 | 50.91 | 84 | 159 |
positive regulation of attachment of mitotic spindle microtubules to kinetochore
|
448,498.70 | 20.28 | 88 | 432 |
CRD-mediated mRNA stability complex
|
350,998.97 | 15.88 | 88 | 552 |
piRNA binding
|
301,793.50 | 13.66 | 88 | 642 |
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
|
260,418.58 | 11.80 | 88 | 744 |
adaptive thermogenesis
|
233,221.36 | 10.51 | 84 | 793 |
Totals | 7274 | 81852551 |
No co-occurrence statistics for GO:0098577 based on MANUAL annotations
The top 92 of 92 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
inactive sex chromosome
|
470,511.00 | 100.00 | 3 | 3 |
RNA localization to chromatin
|
352,883.25 | 75.00 | 3 | 4 |
protein localization to spindle microtubule
|
282,306.60 | 60.00 | 3 | 5 |
positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
|
85,547.46 | 16.67 | 2 | 11 |
negative regulation of kinase activity
|
85,547.46 | 16.67 | 2 | 11 |
poly(C) RNA binding
|
70,576.65 | 15.00 | 3 | 20 |
dendritic transport of messenger ribonucleoprotein complex
|
67,215.86 | 13.33 | 2 | 14 |
positive regulation of attachment of mitotic spindle microtubules to kinetochore
|
50,411.90 | 10.71 | 3 | 28 |
dosage compensation by inactivation of X chromosome
|
40,329.52 | 8.57 | 3 | 35 |
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
|
36,193.16 | 7.69 | 3 | 39 |
Totals | 244 | 660195 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2014-01-17 | Added | DEFINITION | A sex chromosome that has been inactivated. |
2014-01-17 | Added | RELATION | is a GO:0000803 (sex chromosome) |
2014-01-17 | Added | SYNONYM | inactivated sex chromosome |
2014-01-17 | Added | TERM | inactive sex chromosome |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-01-17 | Added | TERM | inactive sex chromosome |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-01-17 | Added | DEFINITION | A sex chromosome that has been inactivated. |
2014-01-17 | Added | SYNONYM | inactivated sex chromosome |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-01-17 | Added | RELATION | is a GO:0000803 (sex chromosome) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
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