GO:0098586
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cellular response to virus
Biological Process
Definition (GO:0098586 GONUTS page)
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0098586
Child Term | Relationship to GO:0098586 |
---|---|
phage shock
|
is_a |
suppression by virus of host cell lysis in response to superinfection
|
is_a |
GO Discussions
The GO editorial group is intending to improve the information provided in this area of the GO. If you would like to be involved in discussions regarding this development activity, please email the GO Consortium. Please note that it is still appropriate to use this term for curation or analysis purpose:
Ontology Development Project | |
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Viral Processes | Link |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0098586 | cellular response to virus | Never in Taxon | 4895 | Schizosaccharomyces |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q9SST3 | 3702 | Q9SST3_ARATH | GO:0009615 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:14666423 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0098586 based on ALL annotations
The top 100 of 2,344 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
cellular response to virus
|
43,994.31 | 100.00 | 4,431 | 4,431 |
positive regulation of interferon-beta production
|
10,683.92 | 11.05 | 747 | 3,076 |
positive regulation of interferon-alpha production
|
13,125.87 | 10.01 | 580 | 1,944 |
positive regulation of defense response to virus by host
|
5,149.53 | 5.31 | 392 | 3,349 |
cellular response to interleukin-1
|
5,508.91 | 5.16 | 358 | 2,859 |
negative regulation of miRNA transcription
|
6,001.21 | 4.46 | 275 | 2,016 |
cellular response to dsRNA
|
23,725.93 | 4.33 | 199 | 369 |
positive regulation of interleukin-6 production
|
2,576.22 | 4.13 | 545 | 9,307 |
regulation of transforming growth factor beta2 production
|
18,995.31 | 4.12 | 193 | 447 |
positive regulation of type I interferon-mediated signaling pathway
|
4,656.45 | 4.11 | 279 | 2,636 |
Totals | 25281 | 273687 |
No co-occurrence statistics for GO:0098586 based on MANUAL annotations
The top 100 of 2,011 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
cellular response to virus
|
4,207.81 | 100.00 | 307 | 307 |
positive regulation of interferon-beta production
|
876.63 | 9.41 | 45 | 216 |
positive regulation of interferon-alpha production
|
932.41 | 8.78 | 39 | 176 |
siRNA binding
|
606.37 | 6.56 | 33 | 229 |
type I interferon-mediated signaling pathway
|
389.61 | 6.02 | 45 | 486 |
positive regulation of defense response to virus by host
|
585.62 | 5.70 | 27 | 194 |
defense response to virus
|
270.54 | 5.61 | 94 | 1,462 |
type I interferon receptor activity
|
1,514.81 | 5.31 | 18 | 50 |
response to exogenous dsRNA
|
451.95 | 5.29 | 29 | 270 |
positive regulation of type I interferon production
|
419.38 | 5.19 | 30 | 301 |
Totals | 1763 | 20274 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
2014-01-29 | Added | TERM | cellular response to virus |
2014-01-29 | Added | RELATION | is a GO:0009615 (response to virus) |
2014-01-29 | Added | DEFINITION | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-01-29 | Added | TERM | cellular response to virus |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-01-29 | Added | DEFINITION | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-01-29 | Added | RELATION | is a GO:0009615 (response to virus) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
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