This term is obsolete.

GO:0098965 JSON

extracellular matrix of synaptic cleft

Cellular Component

Definition (GO:0098965 GONUTS page)

The portion of the extracellular matrix that lies within the synaptic cleft.

90 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
ECM of synaptic cleft exact
synaptic cleft ECM exact

Ancestor Chart

Ancestor chart for GO:0098965
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0098965 extracellular matrix of synaptic cleft Only in Taxon 33208 Metazoa

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P00750 9606 TPA_HUMAN GO:0062023 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:1632457
NOT-qualified manual protein P19637 10116 TPA_RAT GO:0062023 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0098965 based on ALL annotations
The top 100 of 170 co-occurring terms
Co-occurring Term PR S% #Together #Compared
extracellular matrix of synaptic cleft
2,752,151.00 100.00 72 72
laminin-10 complex
1,011,332.50 34.46 61 166
trunk neural crest cell migration
524,628.75 18.43 61 320
morphogenesis of a polarized epithelium
310,891.12 11.07 61 540
cell adhesion mediator activity
219,739.78 7.87 61 764
postsynapse organization
189,696.27 6.81 61 885
branching involved in salivary gland morphogenesis
169,920.25 6.11 61 988
mesenchymal-epithelial cell signaling involved in prostate gland development
172,009.44 4.17 8 128
cellular response to prostaglandin D stimulus
143,903.31 3.69 8 153
regulation of epithelial cell proliferation
94,474.51 3.41 61 1,777
Totals 2474 1718396
No co-occurrence statistics for GO:0098965 based on MANUAL annotations
The top 100 of 152 co-occurring terms
Co-occurring Term PR S% #Together #Compared
extracellular matrix of synaptic cleft
94,102.20 100.00 15 15
mesenchymal-epithelial cell signaling involved in prostate gland development
56,461.32 31.58 6 10
bud outgrowth involved in lung branching
40,329.52 26.09 6 14
trunk neural crest cell migration
37,640.88 25.00 6 15
tenascin complex
31,367.40 22.22 6 18
laminin-10 complex
31,367.40 22.22 6 18
cellular response to prostaglandin D stimulus
29,716.48 21.43 6 19
laminin-5 complex
27,677.12 18.52 5 17
perisynaptic extracellular matrix
18,820.44 15.38 6 30
response to fibroblast growth factor
18,213.33 15.00 6 31
Totals 396 29710

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_synapse 357

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:33208 (Metazoa)
2020-12-20 Deleted RELATION part of GO:0043083 (synaptic cleft)
2019-09-12 Deleted RELATION is a GO:0044420 (obsolete extracellular matrix component)
2019-09-12 Deleted RELATION is a GO:0044456 (obsolete synapse part)
2018-04-15 Deleted RELATION is a GO:0005578 (proteinaceous extracellular matrix)
2018-04-15 Added RELATION is a GO:0062023 (collagen-containing extracellular matrix)
2016-06-11 Added RELATION part of GO:0043083 (synaptic cleft)
2016-06-11 Added RELATION is a GO:0044420 (obsolete extracellular matrix component)
2016-06-11 Added SUBSET goslim_synapse
2016-06-11 Added RELATION is a GO:0005578 (proteinaceous extracellular matrix)
Timestamp Action Category Detail
2016-06-11 Added TERM extracellular matrix of synaptic cleft
Timestamp Action Category Detail
2016-06-11 Added DEFINITION The portion of the extracellular matrix that lies within the synaptic cleft.
2016-06-11 Added SYNONYM ECM of synaptic cleft
2016-06-11 Added SYNONYM synaptic cleft ECM
Timestamp Action Category Detail
2020-12-20 Deleted RELATION part of GO:0043083 (synaptic cleft)
2019-09-12 Deleted RELATION is a GO:0044420 (obsolete extracellular matrix component)
2019-09-12 Deleted RELATION is a GO:0044456 (obsolete synapse part)
2018-04-15 Deleted RELATION is a GO:0005578 (proteinaceous extracellular matrix)
2018-04-15 Added RELATION is a GO:0062023 (collagen-containing extracellular matrix)
2016-06-11 Added RELATION part of GO:0043083 (synaptic cleft)
2016-06-11 Added RELATION is a GO:0044420 (obsolete extracellular matrix component)
2016-06-11 Added RELATION is a GO:0005578 (proteinaceous extracellular matrix)
2016-06-11 Added RELATION part of GO:0099535 (synapse-associated extracellular matrix)
2016-06-11 Added RELATION is a GO:0044456 (obsolete synapse part)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:33208 (Metazoa)
2016-06-11 Added SUBSET goslim_synapse
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