GO:0098965
JSON
extracellular matrix of synaptic cleft
Cellular Component
Definition (GO:0098965 GONUTS page)
The portion of the extracellular matrix that lies within the synaptic cleft.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
ECM of synaptic cleft | exact |
synaptic cleft ECM | exact |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0098965 | extracellular matrix of synaptic cleft | Only in Taxon | 33208 | Metazoa |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P00750 | 9606 | TPA_HUMAN | GO:0062023 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:1632457 | |
NOT-qualified manual | protein | P19637 | 10116 | TPA_RAT | GO:0062023 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0098965 based on ALL annotations
The top 100 of 170 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
extracellular matrix of synaptic cleft
|
2,752,151.00 | 100.00 | 72 | 72 |
laminin-10 complex
|
1,011,332.50 | 34.46 | 61 | 166 |
trunk neural crest cell migration
|
524,628.75 | 18.43 | 61 | 320 |
morphogenesis of a polarized epithelium
|
310,891.12 | 11.07 | 61 | 540 |
cell adhesion mediator activity
|
219,739.78 | 7.87 | 61 | 764 |
postsynapse organization
|
189,696.27 | 6.81 | 61 | 885 |
branching involved in salivary gland morphogenesis
|
169,920.25 | 6.11 | 61 | 988 |
mesenchymal-epithelial cell signaling involved in prostate gland development
|
172,009.44 | 4.17 | 8 | 128 |
cellular response to prostaglandin D stimulus
|
143,903.31 | 3.69 | 8 | 153 |
regulation of epithelial cell proliferation
|
94,474.51 | 3.41 | 61 | 1,777 |
Totals | 2474 | 1718396 |
No co-occurrence statistics for GO:0098965 based on MANUAL annotations
The top 100 of 152 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
extracellular matrix of synaptic cleft
|
94,102.20 | 100.00 | 15 | 15 |
mesenchymal-epithelial cell signaling involved in prostate gland development
|
56,461.32 | 31.58 | 6 | 10 |
bud outgrowth involved in lung branching
|
40,329.52 | 26.09 | 6 | 14 |
trunk neural crest cell migration
|
37,640.88 | 25.00 | 6 | 15 |
tenascin complex
|
31,367.40 | 22.22 | 6 | 18 |
laminin-10 complex
|
31,367.40 | 22.22 | 6 | 18 |
cellular response to prostaglandin D stimulus
|
29,716.48 | 21.43 | 6 | 19 |
laminin-5 complex
|
27,677.12 | 18.52 | 5 | 17 |
perisynaptic extracellular matrix
|
18,820.44 | 15.38 | 6 | 30 |
response to fibroblast growth factor
|
18,213.33 | 15.00 | 6 | 31 |
Totals | 396 | 29710 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_synapse | 357 |
Change Log
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- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:33208 (Metazoa) |
2020-12-20 | Deleted | RELATION | part of GO:0043083 (synaptic cleft) |
2019-09-12 | Deleted | RELATION | is a GO:0044420 (obsolete extracellular matrix component) |
2019-09-12 | Deleted | RELATION | is a GO:0044456 (obsolete synapse part) |
2018-04-15 | Deleted | RELATION | is a GO:0005578 (proteinaceous extracellular matrix) |
2018-04-15 | Added | RELATION | is a GO:0062023 (collagen-containing extracellular matrix) |
2016-06-11 | Added | RELATION | part of GO:0043083 (synaptic cleft) |
2016-06-11 | Added | RELATION | is a GO:0044420 (obsolete extracellular matrix component) |
2016-06-11 | Added | SUBSET | goslim_synapse |
2016-06-11 | Added | RELATION | is a GO:0005578 (proteinaceous extracellular matrix) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2016-06-11 | Added | TERM | extracellular matrix of synaptic cleft |
Timestamp | Action | Category | Detail |
---|---|---|---|
2016-06-11 | Added | DEFINITION | The portion of the extracellular matrix that lies within the synaptic cleft. |
2016-06-11 | Added | SYNONYM | ECM of synaptic cleft |
2016-06-11 | Added | SYNONYM | synaptic cleft ECM |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-12-20 | Deleted | RELATION | part of GO:0043083 (synaptic cleft) |
2019-09-12 | Deleted | RELATION | is a GO:0044420 (obsolete extracellular matrix component) |
2019-09-12 | Deleted | RELATION | is a GO:0044456 (obsolete synapse part) |
2018-04-15 | Deleted | RELATION | is a GO:0005578 (proteinaceous extracellular matrix) |
2018-04-15 | Added | RELATION | is a GO:0062023 (collagen-containing extracellular matrix) |
2016-06-11 | Added | RELATION | part of GO:0043083 (synaptic cleft) |
2016-06-11 | Added | RELATION | is a GO:0044420 (obsolete extracellular matrix component) |
2016-06-11 | Added | RELATION | is a GO:0005578 (proteinaceous extracellular matrix) |
2016-06-11 | Added | RELATION | part of GO:0099535 (synapse-associated extracellular matrix) |
2016-06-11 | Added | RELATION | is a GO:0044456 (obsolete synapse part) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:33208 (Metazoa) |
2016-06-11 | Added | SUBSET | goslim_synapse |
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