GO:0106217
JSON
tRNA C3-cytosine methylation
Biological Process
Definition (GO:0106217 GONUTS page)
The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. PMID:28655767
Ancestor Chart
Ancestor chart for GO:0106217
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | F4IL30 | 3702 | POP1_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 | |
NOT-qualified manual | protein | O14133 | 284812 | ATE1_SCHPO | GO:0006399 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000303 from this reference: GO_REF:0000051 | |
NOT-qualified manual | protein | Q9M658 | 3702 | MOM1_ARATH | GO:0032259 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10821279 | |
NOT-qualified manual | protein | Q9SB36 | 3702 | PP337_ARATH | GO:0009451 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264 | |
NOT-qualified manual | protein | Q9ZW76 | 3702 | POP4_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0106217 based on ALL annotations
The top 49 of 49 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
tRNA C3-cytosine methylation
|
132,722.61 | 100.00 | 1,493 | 1,493 |
tRNA metabolic process
|
2,327.61 | 1.73 | 858 | 48,924 |
tRNA (cytidine-3-)-methyltransferase activity
|
2,560.47 | 1.46 | 85 | 4,406 |
arginyl-tRNA aminoacylation
|
1,943.96 | 1.46 | 1,240 | 84,660 |
arginine-tRNA ligase activity
|
1,941.03 | 1.46 | 1,240 | 84,788 |
gene expression
|
1,483.61 | 1.11 | 858 | 76,756 |
mitochondrial tRNA modification
|
3,855.01 | 0.41 | 7 | 241 |
mRNA metabolic process
|
194.04 | 0.11 | 7 | 4,788 |
tRNA binding
|
142.03 | 0.11 | 1,408 | 1,315,720 |
positive regulation of mitochondrial translation
|
131.70 | 0.08 | 8 | 8,062 |
Totals | 8993 | 219103869 |
No co-occurrence statistics for GO:0106217 based on MANUAL annotations
The top 17 of 17 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
tRNA C3-cytosine methylation
|
40,329.52 | 100.00 | 35 | 35 |
mRNA methyltransferase activity
|
32,263.61 | 21.62 | 8 | 10 |
tRNA (cytidine-3-)-methyltransferase activity
|
5,377.27 | 10.00 | 10 | 75 |
mRNA metabolic process
|
4,277.37 | 7.45 | 7 | 66 |
mitochondrial tRNA modification
|
2,880.68 | 5.56 | 7 | 98 |
positive regulation of mitochondrial translation
|
1,507.65 | 3.32 | 8 | 214 |
fat cell differentiation
|
521.82 | 1.23 | 7 | 541 |
skeletal muscle tissue development
|
506.83 | 1.20 | 7 | 557 |
tRNA binding
|
387.19 | 0.96 | 25 | 2,604 |
histone acetyltransferase activity
|
287.19 | 0.69 | 7 | 983 |
Totals | 156 | 658055 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | RELATION | is a GO:0030488 (tRNA methylation) |
2019-08-16 | Added | DEFINITION | The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. |
2019-08-16 | Added | TERM | tRNA C3-cytosine methylation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | TERM | tRNA C3-cytosine methylation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | DEFINITION | The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | RELATION | is a GO:0030488 (tRNA methylation) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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