GO:0106217
JSON
tRNA C3-cytosine methylation
Biological Process
Definition (GO:0106217 GONUTS page)
The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. PMID:28655767
Ancestor Chart
Ancestor chart for GO:0106217
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | F4IL30 | 3702 | POP1_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 | |
NOT-qualified manual | protein | O14133 | 284812 | ATE1_SCHPO | GO:0006399 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000303 from this reference: GO_REF:0000051 | |
NOT-qualified manual | protein | Q9M658 | 3702 | MOM1_ARATH | GO:0032259 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10821279 | |
NOT-qualified manual | protein | Q9SB36 | 3702 | PP337_ARATH | GO:0009451 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264 | |
NOT-qualified manual | protein | Q9ZW76 | 3702 | POP4_ARATH | GO:0008033 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0106217 based on ALL annotations
The top 49 of 49 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
tRNA C3-cytosine methylation
|
135,751.25 | 100.00 | 1,436 | 1,436 |
gene expression
|
2,386.26 | 1.74 | 835 | 47,502 |
tRNA metabolic process
|
2,362.54 | 1.72 | 835 | 47,979 |
tRNA (cytidine-3-)-methyltransferase activity
|
2,653.22 | 1.49 | 85 | 4,349 |
arginyl-tRNA aminoacylation
|
1,941.89 | 1.43 | 1,192 | 83,329 |
arginine-tRNA ligase activity
|
1,938.91 | 1.42 | 1,192 | 83,457 |
mitochondrial tRNA modification
|
4,026.52 | 0.42 | 7 | 236 |
mRNA metabolic process
|
203.96 | 0.11 | 7 | 4,659 |
tRNA binding
|
141.95 | 0.10 | 1,351 | 1,291,960 |
positive regulation of mitochondrial translation
|
137.94 | 0.09 | 8 | 7,873 |
Totals | 8686 | 210484606 |
No co-occurrence statistics for GO:0106217 based on MANUAL annotations
The top 17 of 17 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
tRNA C3-cytosine methylation
|
40,368.72 | 100.00 | 32 | 32 |
mRNA methyltransferase activity
|
32,294.98 | 23.53 | 8 | 10 |
tRNA (cytidine-3-)-methyltransferase activity
|
5,606.77 | 10.64 | 10 | 72 |
mRNA metabolic process
|
4,281.53 | 7.69 | 7 | 66 |
mitochondrial tRNA modification
|
3,139.79 | 6.09 | 7 | 90 |
positive regulation of mitochondrial translation
|
1,530.57 | 3.40 | 8 | 211 |
fat cell differentiation
|
555.17 | 1.31 | 7 | 509 |
skeletal muscle tissue development
|
492.30 | 1.17 | 7 | 574 |
tRNA binding
|
368.97 | 0.91 | 22 | 2,407 |
histone acetyltransferase activity
|
288.35 | 0.70 | 7 | 980 |
Totals | 150 | 615103 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | TERM | tRNA C3-cytosine methylation |
2019-08-16 | Added | DEFINITION | The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. |
2019-08-16 | Added | RELATION | is a GO:0030488 (tRNA methylation) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | TERM | tRNA C3-cytosine methylation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | DEFINITION | The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-08-16 | Added | RELATION | is a GO:0030488 (tRNA methylation) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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