This term is obsolete.

GO:0106217 JSON

tRNA C3-cytosine methylation

Biological Process

Definition (GO:0106217 GONUTS page)

The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine. PMID:28655767

1,448 annotations

Ancestor Chart

Ancestor chart for GO:0106217
Chart options
Ancestor chart

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein F4IL30 3702 POP1_ARATH GO:0008033 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728
NOT-qualified manual protein O14133 284812 ATE1_SCHPO GO:0006399 1 NOT-qualified manual annotation exists with evidence code ECO:0000303 from this reference: GO_REF:0000051
NOT-qualified manual protein Q9M658 3702 MOM1_ARATH GO:0032259 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10821279
NOT-qualified manual protein Q9SB36 3702 PP337_ARATH GO:0009451 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264
NOT-qualified manual protein Q9ZW76 3702 POP4_ARATH GO:0008033 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:22549728

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0106217 based on ALL annotations
The top 49 of 49 co-occurring terms
Co-occurring Term PR S% #Together #Compared
tRNA C3-cytosine methylation
135,751.25 100.00 1,436 1,436
gene expression
2,386.26 1.74 835 47,502
tRNA metabolic process
2,362.54 1.72 835 47,979
tRNA (cytidine-3-)-methyltransferase activity
2,653.22 1.49 85 4,349
arginyl-tRNA aminoacylation
1,941.89 1.43 1,192 83,329
arginine-tRNA ligase activity
1,938.91 1.42 1,192 83,457
mitochondrial tRNA modification
4,026.52 0.42 7 236
mRNA metabolic process
203.96 0.11 7 4,659
tRNA binding
141.95 0.10 1,351 1,291,960
positive regulation of mitochondrial translation
137.94 0.09 8 7,873
Totals 8686 210484606
No co-occurrence statistics for GO:0106217 based on MANUAL annotations
The top 17 of 17 co-occurring terms
Co-occurring Term PR S% #Together #Compared
tRNA C3-cytosine methylation
40,368.72 100.00 32 32
mRNA methyltransferase activity
32,294.98 23.53 8 10
tRNA (cytidine-3-)-methyltransferase activity
5,606.77 10.64 10 72
mRNA metabolic process
4,281.53 7.69 7 66
mitochondrial tRNA modification
3,139.79 6.09 7 90
positive regulation of mitochondrial translation
1,530.57 3.40 8 211
fat cell differentiation
555.17 1.31 7 509
skeletal muscle tissue development
492.30 1.17 7 574
tRNA binding
368.97 0.91 22 2,407
histone acetyltransferase activity
288.35 0.70 7 980
Totals 150 615103

Change Log

Timestamp Action Category Detail
2019-08-16 Added TERM tRNA C3-cytosine methylation
2019-08-16 Added DEFINITION The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.
2019-08-16 Added RELATION is a GO:0030488 (tRNA methylation)
Timestamp Action Category Detail
2019-08-16 Added TERM tRNA C3-cytosine methylation
Timestamp Action Category Detail
2019-08-16 Added DEFINITION The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.
Timestamp Action Category Detail
2019-08-16 Added RELATION is a GO:0030488 (tRNA methylation)
Timestamp Action Category Detail
Timestamp Action Category Detail
Please Wait...

Not found :(

Sorry, but the Term you were trying to view does not exist.

Reported error:

It looks like this may have been caused by:

  • a mistyped URL
  • an out-of-date link
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice and Terms of Use.