This term is obsolete.

GO:0140098 JSON

catalytic activity, acting on RNA

Molecular Function

Definition (GO:0140098 GONUTS page)

Catalytic activity that acts to modify RNA.

9,410,518 annotations

Ancestor Chart

Ancestor chart for GO:0140098
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0140098

Child Term Relationship to
GO:0140098
RNA helicase activity
is_a
RNA-3'-phosphate cyclase activity
is_a
RNA nuclease activity
is_a
oxidative RNA demethylase activity
is_a
catalytic activity, acting on a rRNA
is_a
mRNA 5'-triphosphate monophosphatase activity
is_a
RNA methyltransferase activity
is_a
catalytic activity, acting on a tRNA
is_a
tyrosyl-RNA phosphodiesterase activity
is_a
rRNA pseudouridine synthase activity
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating to catalytic activities using the IPI evidence code Link
Describing enzyme functions that catalyse multi-stage reactions Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P02521 9031 ARLY1_CHICK GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q7KGG1 7227 Q7KGG1_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370
NOT-qualified manual protein Q7SIE0 9103 ARLY1_MELGA GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q8MZ84 7227 Q8MZ84_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_input CHEBI CHEBI:33697 ribonucleic acid

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0140098 based on ALL annotations
The top 100 of 302 co-occurring terms
Co-occurring Term PR S% #Together #Compared
catalytic activity, acting on RNA
1,076.88 100.00 184,009 184,009
pseudouridine synthase activity
548.71 50.95 184,008 361,129
pseudouridine synthesis
514.06 47.74 184,008 385,465
tRNA pseudouridine synthesis
836.31 42.97 90,221 116,173
mRNA pseudouridine synthesis
696.19 20.18 41,729 64,547
enzyme-directed rRNA pseudouridine synthesis
345.39 19.27 59,927 186,843
tRNA pseudouridine(38-40) synthase activity
945.69 17.26 32,541 37,055
tRNA pseudouridine(55) synthase activity
927.55 15.95 30,121 34,970
RNA processing
170.97 15.66 169,056 1,064,849
tRNA processing
63.77 5.67 105,280 1,777,988
Totals 1517661 129411254
No co-occurrence statistics for GO:0140098 based on MANUAL annotations
The top 5 of 5 co-occurring terms
Co-occurring Term PR S% #Together #Compared
catalytic activity, acting on RNA
1,411,533.00 100.00 1 1
tRNA (m1A) methyltransferase complex
5,208.61 0.37 1 271
tRNA processing
1,755.64 0.12 1 804
tRNA methylation
735.56 0.05 1 1,919
nucleus
6.78 0.00 1 208,176
Totals 5 211171

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_prokaryote
goslim_generic 141

Change Log

Timestamp Action Category Detail
2025-02-13 Added DEFINITION Catalytic activity that acts to modify RNA.
2025-02-13 Deleted DEFINITION Catalytic activity that acts to modify RNA, driven by ATP hydrolysis.
2023-12-15 Added SUBSET goslim_prokaryote
2022-01-12 Added SUBSET goslim_generic
2021-07-04 Added DEFINITION Catalytic activity that acts to modify RNA, driven by ATP hydrolysis.
2021-07-04 Deleted DEFINITION Catalytic activity that acts to modify RNA.
2021-05-15 Deleted RELATION is a GO:0003824 (catalytic activity)
2021-05-15 Added RELATION is a GO:0140640 (catalytic activity, acting on a nucleic acid)
2017-09-19 Added DEFINITION Catalytic activity that acts to modify RNA.
2017-09-19 Added RELATION is a GO:0003824 (catalytic activity)
Timestamp Action Category Detail
2017-09-19 Added TERM catalytic activity, acting on RNA
Timestamp Action Category Detail
2025-02-13 Added DEFINITION Catalytic activity that acts to modify RNA.
2025-02-13 Deleted DEFINITION Catalytic activity that acts to modify RNA, driven by ATP hydrolysis.
2021-07-04 Added DEFINITION Catalytic activity that acts to modify RNA, driven by ATP hydrolysis.
2021-07-04 Deleted DEFINITION Catalytic activity that acts to modify RNA.
2017-09-19 Added DEFINITION Catalytic activity that acts to modify RNA.
Timestamp Action Category Detail
2021-05-15 Deleted RELATION is a GO:0003824 (catalytic activity)
2021-05-15 Added RELATION is a GO:0140640 (catalytic activity, acting on a nucleic acid)
2017-09-19 Added RELATION is a GO:0003824 (catalytic activity)
Timestamp Action Category Detail
Timestamp Action Category Detail
2023-12-15 Added SUBSET goslim_prokaryote
2022-01-12 Added SUBSET goslim_generic
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