Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.
GO:0140101
JSON
catalytic activity, acting on a tRNA
Molecular Function
Definition (GO:0140101 GONUTS page)
Catalytic activity that acts to modify a tRNA.
Comments
Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.
Ancestor Chart
Ancestor chart for GO:0140101
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0140101
Child Term | Relationship to GO:0140101 |
---|---|
tRNA 5-taurinomethyluridine synthase activity
|
is_a |
aminoacyl-tRNA hydrolase activity
|
is_a |
tRNA dimethylallyltransferase activity
|
is_a |
CC tRNA cytidylyltransferase activity
|
is_a |
ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
|
is_a |
tRNA-specific ribonuclease activity
|
is_a |
tRNA-uridine 2-sulfurtransferase activity
|
is_a |
CCA tRNA nucleotidyltransferase activity
|
is_a |
tRNA methyltransferase activity
|
is_a |
L-seryl-tRNA(Sec) selenium transferase activity
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to catalytic activities using the IPI evidence code | Link |
Describing enzyme functions that catalyse multi-stage reactions | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P02521 | 9031 | ARLY1_CHICK | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884 | |
NOT-qualified manual | protein | Q7KGG1 | 7227 | Q7KGG1_DROME | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370 | |
NOT-qualified manual | protein | Q7SIE0 | 9103 | ARLY1_MELGA | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884 | |
NOT-qualified manual | protein | Q8MZ84 | 7227 | Q8MZ84_DROME | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_input | CHEBI | CHEBI:17843 | transfer RNA |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0140101 based on ALL annotations
The top 100 of 273 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
catalytic activity, acting on a tRNA
|
1,502.02 | 100.00 | 131,926 | 131,926 |
tRNA aminoacylation for protein translation
|
510.93 | 33.98 | 131,558 | 386,749 |
threonyl-tRNA aminoacylation
|
1,083.66 | 30.48 | 45,569 | 63,161 |
threonine-tRNA ligase activity
|
1,066.05 | 30.28 | 45,585 | 64,227 |
histidine-tRNA ligase activity
|
834.32 | 24.75 | 40,718 | 73,304 |
histidyl-tRNA aminoacylation
|
836.41 | 24.66 | 40,469 | 72,674 |
proline-tRNA ligase activity
|
524.80 | 12.80 | 22,175 | 63,466 |
prolyl-tRNA aminoacylation
|
526.34 | 12.80 | 22,137 | 63,172 |
glycyl-tRNA aminoacylation
|
402.16 | 11.04 | 20,875 | 77,966 |
glycine-tRNA ligase activity
|
394.34 | 10.96 | 20,901 | 79,611 |
Totals | 1165501 | 154738074 |
No co-occurrence statistics for GO:0140101 based on MANUAL annotations
The top 17 of 17 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
catalytic activity, acting on a tRNA
|
282,306.60 | 100.00 | 5 | 5 |
Cdc48p-Npl4p-Vms1p AAA ATPase complex
|
47,051.10 | 10.00 | 1 | 6 |
mitochondria-associated ubiquitin-dependent protein catabolic process
|
20,164.76 | 5.56 | 1 | 14 |
nuclear protein quality control by the ubiquitin-proteasome system
|
3,976.15 | 1.33 | 1 | 71 |
cellular response to hydrogen peroxide
|
2,714.49 | 0.96 | 4 | 416 |
rescue of stalled ribosome
|
1,626.19 | 0.58 | 5 | 868 |
protein quality control for misfolded or incompletely synthesized proteins
|
1,139.25 | 0.40 | 5 | 1,239 |
aminoacyl-tRNA hydrolase activity
|
564.61 | 0.20 | 1 | 500 |
RNA endonuclease activity
|
476.55 | 0.17 | 5 | 2,962 |
ERAD pathway
|
239.65 | 0.08 | 4 | 4,712 |
Totals | 45 | 480013 |
Change Log
- All changes
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- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | RELATION | is a GO:0140098 (catalytic activity, acting on RNA) |
2017-09-19 | Added | DEFINITION | Catalytic activity that acts to modify a tRNA. |
2017-09-19 | Added | TERM | catalytic activity, acting on a tRNA |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | TERM | catalytic activity, acting on a tRNA |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | DEFINITION | Catalytic activity that acts to modify a tRNA. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | RELATION | is a GO:0140098 (catalytic activity, acting on RNA) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
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