Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.
GO:0140101
JSON
catalytic activity, acting on a tRNA
Molecular Function
Definition (GO:0140101 GONUTS page)
Catalytic activity that acts to modify a tRNA.
Comments
Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.
Ancestor Chart
Ancestor chart for GO:0140101
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0140101
Child Term | Relationship to GO:0140101 |
---|---|
aminoacyl-tRNA ligase activity
|
is_a |
glutamyl-tRNA reductase activity
|
is_a |
tRNA methyltransferase activity
|
is_a |
CCA tRNA nucleotidyltransferase activity
|
is_a |
tRNA adenosine(64)-2'-O-ribosylphosphate transferase activity
|
is_a |
tRNA-uridine 2-sulfurtransferase activity
|
is_a |
tRNA demethylase activity
|
is_a |
tRNA guanylyltransferase activity
|
is_a |
aminoacyl-tRNA hydrolase activity
|
is_a |
tRNA dimethylallyltransferase activity
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to catalytic activities using the IPI evidence code | Link |
Describing enzyme functions that catalyse multi-stage reactions | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P02521 | 9031 | ARLY1_CHICK | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884 | |
NOT-qualified manual | protein | Q7KGG1 | 7227 | Q7KGG1_DROME | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370 | |
NOT-qualified manual | protein | Q7SIE0 | 9103 | ARLY1_MELGA | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884 | |
NOT-qualified manual | protein | Q8MZ84 | 7227 | Q8MZ84_DROME | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_input | CHEBI | CHEBI:17843 | transfer RNA |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0140101 based on ALL annotations
The top 100 of 275 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
catalytic activity, acting on a tRNA
|
1,497.43 | 100.00 | 130,182 | 130,182 |
tRNA aminoacylation for protein translation
|
509.68 | 34.00 | 129,800 | 381,347 |
threonyl-tRNA aminoacylation
|
1,083.19 | 30.50 | 44,949 | 62,139 |
threonine-tRNA ligase activity
|
1,065.28 | 30.30 | 44,965 | 63,206 |
histidine-tRNA ligase activity
|
832.43 | 24.77 | 40,207 | 72,327 |
histidyl-tRNA aminoacylation
|
834.54 | 24.68 | 39,957 | 71,696 |
proline-tRNA ligase activity
|
524.89 | 12.82 | 21,888 | 62,443 |
prolyl-tRNA aminoacylation
|
526.48 | 12.82 | 21,850 | 62,147 |
glycyl-tRNA aminoacylation
|
400.30 | 11.03 | 20,568 | 76,940 |
glycine-tRNA ligase activity
|
392.57 | 10.95 | 20,594 | 78,554 |
Totals | 1169824 | 147451240 |
No co-occurrence statistics for GO:0140101 based on MANUAL annotations
The top 17 of 17 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
catalytic activity, acting on a tRNA
|
258,359.80 | 100.00 | 5 | 5 |
Cdc48p-Npl4p-Vms1p AAA ATPase complex
|
43,059.97 | 10.00 | 1 | 6 |
mitochondria-associated ubiquitin-dependent protein catabolic process
|
18,454.27 | 5.56 | 1 | 14 |
nuclear protein quality control by the ubiquitin-proteasome system
|
4,306.00 | 1.56 | 1 | 60 |
cellular response to hydrogen peroxide
|
2,514.45 | 0.97 | 4 | 411 |
rescue of stalled ribosome
|
1,590.89 | 0.62 | 5 | 812 |
protein quality control for misfolded or incompletely synthesized proteins
|
1,108.84 | 0.43 | 5 | 1,165 |
aminoacyl-tRNA hydrolase activity
|
559.22 | 0.21 | 1 | 462 |
RNA endonuclease activity
|
484.00 | 0.19 | 5 | 2,669 |
ERAD pathway
|
233.65 | 0.09 | 4 | 4,423 |
Totals | 45 | 445447 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | RELATION | is a GO:0140098 (catalytic activity, acting on RNA) |
2017-09-19 | Added | DEFINITION | Catalytic activity that acts to modify a tRNA. |
2017-09-19 | Added | TERM | catalytic activity, acting on a tRNA |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | TERM | catalytic activity, acting on a tRNA |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | DEFINITION | Catalytic activity that acts to modify a tRNA. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-09-19 | Added | RELATION | is a GO:0140098 (catalytic activity, acting on RNA) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|
Please Wait...
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link