This term is obsolete.
Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.

GO:0140101 JSON

catalytic activity, acting on a tRNA

Molecular Function

Definition (GO:0140101 GONUTS page)

Catalytic activity that acts to modify a tRNA.

Comments

Note that this term excludes activities for which a charged tRNA acts as an amino acid donor.

4,909,461 annotations

Ancestor Chart

Ancestor chart for GO:0140101
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0140101

Child Term Relationship to
GO:0140101
tRNA 5-taurinomethyluridine synthase activity
is_a
aminoacyl-tRNA hydrolase activity
is_a
tRNA dimethylallyltransferase activity
is_a
CC tRNA cytidylyltransferase activity
is_a
ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
is_a
tRNA-specific ribonuclease activity
is_a
tRNA-uridine 2-sulfurtransferase activity
is_a
CCA tRNA nucleotidyltransferase activity
is_a
tRNA methyltransferase activity
is_a
L-seryl-tRNA(Sec) selenium transferase activity
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating to catalytic activities using the IPI evidence code Link
Describing enzyme functions that catalyse multi-stage reactions Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P02521 9031 ARLY1_CHICK GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q7KGG1 7227 Q7KGG1_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370
NOT-qualified manual protein Q7SIE0 9103 ARLY1_MELGA GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q8MZ84 7227 Q8MZ84_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_input CHEBI CHEBI:17843 transfer RNA

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0140101 based on ALL annotations
The top 100 of 273 co-occurring terms
Co-occurring Term PR S% #Together #Compared
catalytic activity, acting on a tRNA
1,502.02 100.00 131,926 131,926
tRNA aminoacylation for protein translation
510.93 33.98 131,558 386,749
threonyl-tRNA aminoacylation
1,083.66 30.48 45,569 63,161
threonine-tRNA ligase activity
1,066.05 30.28 45,585 64,227
histidine-tRNA ligase activity
834.32 24.75 40,718 73,304
histidyl-tRNA aminoacylation
836.41 24.66 40,469 72,674
proline-tRNA ligase activity
524.80 12.80 22,175 63,466
prolyl-tRNA aminoacylation
526.34 12.80 22,137 63,172
glycyl-tRNA aminoacylation
402.16 11.04 20,875 77,966
glycine-tRNA ligase activity
394.34 10.96 20,901 79,611
Totals 1165501 154738074
No co-occurrence statistics for GO:0140101 based on MANUAL annotations
The top 17 of 17 co-occurring terms
Co-occurring Term PR S% #Together #Compared
catalytic activity, acting on a tRNA
282,306.60 100.00 5 5
Cdc48p-Npl4p-Vms1p AAA ATPase complex
47,051.10 10.00 1 6
mitochondria-associated ubiquitin-dependent protein catabolic process
20,164.76 5.56 1 14
nuclear protein quality control by the ubiquitin-proteasome system
3,976.15 1.33 1 71
cellular response to hydrogen peroxide
2,714.49 0.96 4 416
rescue of stalled ribosome
1,626.19 0.58 5 868
protein quality control for misfolded or incompletely synthesized proteins
1,139.25 0.40 5 1,239
aminoacyl-tRNA hydrolase activity
564.61 0.20 1 500
RNA endonuclease activity
476.55 0.17 5 2,962
ERAD pathway
239.65 0.08 4 4,712
Totals 45 480013

Change Log

Timestamp Action Category Detail
2017-09-19 Added RELATION is a GO:0140098 (catalytic activity, acting on RNA)
2017-09-19 Added DEFINITION Catalytic activity that acts to modify a tRNA.
2017-09-19 Added TERM catalytic activity, acting on a tRNA
Timestamp Action Category Detail
2017-09-19 Added TERM catalytic activity, acting on a tRNA
Timestamp Action Category Detail
2017-09-19 Added DEFINITION Catalytic activity that acts to modify a tRNA.
Timestamp Action Category Detail
2017-09-19 Added RELATION is a GO:0140098 (catalytic activity, acting on RNA)
Timestamp Action Category Detail
Timestamp Action Category Detail
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