Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua.
GO:0140238
JSON
presynaptic endocytosis
Biological Process
Definition (GO:0140238 GONUTS page)
A vesicle-mediated transport process in which the presynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. PMID:24719103
Comments
Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua.
Ancestor Chart
Ancestor chart for GO:0140238
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0140238
| Child Term | Relationship to GO:0140238 |
|---|---|
|
synaptic vesicle endocytosis
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
| Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
|---|---|---|---|---|---|
| GO:0140238 | presynaptic endocytosis | Only in Taxon | 33208 | Metazoa |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
| Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
|---|---|---|---|---|---|---|---|
| NOT-qualified manual | protein | A0A9K3Y7P9 | 10116 | A0A9K3Y7P9_RAT | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | B2RZ46 | 10116 | B2RZ46_RAT | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | O35509 | 10116 | RB11B_RAT | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | P35292 | 10090 | RAB17_MOUSE | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9624171 | |
| NOT-qualified manual | protein | P46638 | 10090 | RB11B_MOUSE | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10942597 | |
| NOT-qualified manual | protein | Q0WQ75 | 3702 | VPS51_ARATH | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:24757006 | |
| NOT-qualified manual | protein | Q8MQJ7 | 7227 | Q8MQJ7_DROME | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:23406899 | |
| NOT-qualified manual | protein | Q9VU14 | 7227 | Q9VU14_DROME | GO:0006897 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:23406899 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0140238 based on ALL annotations
The top 100 of 143 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
presynaptic endocytosis
|
815,452.10 | 100.00 | 243 | 243 |
|
negative regulation of calcium ion export across plasma membrane
|
503,365.50 | 44.64 | 150 | 243 |
|
adenylate cyclase activator activity
|
439,089.60 | 39.84 | 147 | 273 |
|
regulation of cardiac muscle cell action potential
|
255,828.12 | 22.95 | 112 | 357 |
|
organelle localization by membrane tethering
|
199,332.73 | 14.77 | 66 | 270 |
|
calyx of Held
|
133,807.84 | 14.59 | 138 | 841 |
|
titin binding
|
86,487.34 | 9.92 | 147 | 1,386 |
|
presynaptic cytosol
|
68,404.38 | 7.99 | 152 | 1,812 |
|
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
|
66,154.23 | 7.70 | 147 | 1,812 |
|
regulation of calcium-mediated signaling
|
56,109.09 | 6.60 | 150 | 2,180 |
| Totals | 6871 | 9386645 | ||
No co-occurrence statistics for GO:0140238 based on MANUAL annotations
The top 89 of 89 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
presynaptic endocytosis
|
128,321.19 | 100.00 | 11 | 11 |
|
establishment of protein localization to mitochondrial membrane
|
128,321.19 | 27.27 | 3 | 3 |
|
organelle localization by membrane tethering
|
28,515.82 | 16.00 | 4 | 18 |
|
negative regulation of ryanodine-sensitive calcium-release channel activity
|
24,442.13 | 14.29 | 4 | 21 |
|
negative regulation of high voltage-gated calcium channel activity
|
51,328.47 | 14.29 | 2 | 5 |
|
regulation of cardiac muscle cell action potential
|
21,386.86 | 12.90 | 4 | 24 |
|
negative regulation of calcium ion export across plasma membrane
|
36,663.20 | 12.50 | 2 | 7 |
|
calyx of Held
|
13,209.53 | 9.72 | 7 | 68 |
|
nitric-oxide synthase regulator activity
|
13,274.61 | 8.11 | 3 | 29 |
|
establishment of protein localization to membrane
|
11,322.46 | 7.14 | 3 | 34 |
| Totals | 257 | 518277 | ||
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
| GO slim name | Total Number of Terms in Slim |
|---|---|
| goslim_synapse | 357 |
Change Log
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| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:33208 (Metazoa) |
| 2020-03-15 | Added | RELATION | is a GO:0051649 (establishment of localization in cell) |
| 2019-08-30 | Deleted | RELATION | is a GO:0051649 (establishment of localization in cell) |
| 2018-07-17 | Added | TERM | presynaptic endocytosis |
| 2018-07-17 | Added | DEFINITION | A vesicle-mediated transport process in which the presynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. |
| 2018-07-17 | Added | SUBSET | goslim_synapse |
| 2018-07-17 | Added | RELATION | occurs in GO:0098793 (presynapse) |
| 2018-07-17 | Added | RELATION | is a GO:0006897 (endocytosis) |
| 2018-07-17 | Added | RELATION | is a GO:0051649 (establishment of localization in cell) |
| 2018-07-17 | Added | RELATION | is a GO:0099003 (vesicle-mediated transport in synapse) |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2018-07-17 | Added | TERM | presynaptic endocytosis |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2018-07-17 | Added | DEFINITION | A vesicle-mediated transport process in which the presynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2020-03-15 | Added | RELATION | is a GO:0051649 (establishment of localization in cell) |
| 2019-08-30 | Deleted | RELATION | is a GO:0051649 (establishment of localization in cell) |
| 2018-07-17 | Added | RELATION | occurs in GO:0098793 (presynapse) |
| 2018-07-17 | Added | RELATION | is a GO:0006897 (endocytosis) |
| 2018-07-17 | Added | RELATION | is a GO:0051649 (establishment of localization in cell) |
| 2018-07-17 | Added | RELATION | is a GO:0099003 (vesicle-mediated transport in synapse) |
| Timestamp | Action | Category | Detail |
|---|
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:33208 (Metazoa) |
| 2018-07-17 | Added | SUBSET | goslim_synapse |
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