This term is obsolete.

GO:1900160 JSON

plastid chromosome packaging

Biological Process

Definition (GO:1900160 GONUTS page)

A process in which plastidial DNA and associated proteins organize into a compact, orderly structure. PMID:12081370

2 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
DNA organisation in plastid exact
DNA organization in plastid exact
plastid DNA packaging exact
plastidial DNA packaging exact

Ancestor Chart

Ancestor chart for GO:1900160
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:1900160 plastid chromosome packaging Never in Taxon 2 Bacteria
GO:1900160 plastid chromosome packaging Never in Taxon 2157 Archaea
GO:1900160 plastid chromosome packaging Never in Taxon 28009 Choanoflagellata
GO:1900160 plastid chromosome packaging Never in Taxon 33208 Metazoa
GO:1900160 plastid chromosome packaging Never in Taxon 4751 Fungi
GO:1900160 plastid chromosome packaging Never in Taxon 554915 Amoebozoa

More information on taxon constraints in GO is available here

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:1900160 based on ALL annotations
The top 19 of 19 co-occurring terms
Co-occurring Term PR S% #Together #Compared
GO:1900160
plastid chromosome packaging
99,077,430.00 100.00 2 2
GO:0019418
sulfide oxidation
28,307,838.00 28.57 2 7
GO:0010319
stromule
180,468.90 0.18 1 549
GO:0042644
chloroplast nucleoid
44,679.79 0.05 2 4,435
GO:0050311
sulfite reductase (ferredoxin) activity
7,955.15 0.01 2 24,909
GO:0016002
sulfite reductase activity
5,372.09 0.01 1 18,443
GO:0009570
chloroplast stroma
2,311.03 0.00 2 85,743
GO:0009409
response to cold
2,152.03 0.00 1 46,039
GO:0000103
sulfate assimilation
1,553.07 0.00 2 127,589
GO:0006790
sulfur compound metabolic process
879.43 0.00 1 112,661
Totals 32 60809202
No co-occurrence statistics for GO:1900160 based on MANUAL annotations
The top 9 of 9 co-occurring terms
Co-occurring Term PR S% #Together #Compared
GO:1900160
plastid chromosome packaging
705,766.50 100.00 2 2
GO:0019418
sulfide oxidation
201,647.58 28.57 2 7
GO:0050311
sulfite reductase (ferredoxin) activity
22,055.20 3.13 2 64
GO:0042644
chloroplast nucleoid
4,658.53 0.66 2 303
GO:0000103
sulfate assimilation
1,889.60 0.27 2 747
GO:0009570
chloroplast stroma
527.87 0.07 2 2,674
GO:0045892
negative regulation of DNA-templated transcription
236.75 0.03 2 5,962
GO:0003690
double-stranded DNA binding
167.24 0.02 1 4,220
GO:0003677
DNA binding
109.19 0.02 2 12,927
Totals 17 26906

Change Log

Timestamp Action Category Detail
2022-02-17 Deleted DEFINITION Any process in which plastidial DNA and associated proteins are formed into a compact, orderly structure.
2022-02-17 Added DEFINITION A process in which plastidial DNA and associated proteins organize into a compact, orderly structure.
2022-02-17 Deleted RELATION is a GO:0036385 (obsolete nucleoid DNA packaging)
2022-02-17 Added RELATION is a GO:0051276 (chromosome organization)
2022-02-17 Added SYNONYM plastid DNA packaging
2022-02-17 Updated TERM plastid chromosome packaging
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:2 (Bacteria)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
Timestamp Action Category Detail
2022-02-17 Updated TERM plastid chromosome packaging
2012-03-11 Added TERM plastid DNA packaging
Timestamp Action Category Detail
2022-02-17 Deleted DEFINITION Any process in which plastidial DNA and associated proteins are formed into a compact, orderly structure.
2022-02-17 Added DEFINITION A process in which plastidial DNA and associated proteins organize into a compact, orderly structure.
2022-02-17 Added SYNONYM plastid DNA packaging
2012-03-22 Added SYNONYM plastidial DNA packaging
2012-03-11 Added DEFINITION Any process in which plastidial DNA and associated proteins are formed into a compact, orderly structure.
2012-03-11 Added SYNONYM DNA organization in plastid
2012-03-11 Added SYNONYM DNA organisation in plastid
Timestamp Action Category Detail
2022-02-17 Deleted RELATION is a GO:0036385 (obsolete nucleoid DNA packaging)
2022-02-17 Added RELATION is a GO:0051276 (chromosome organization)
2013-06-01 Deleted RELATION is a GO:0006323 (DNA packaging)
2013-06-01 Added RELATION is a GO:0036385 (obsolete nucleoid DNA packaging)
2012-03-11 Added RELATION occurs in GO:0009536 (plastid)
2012-03-11 Added RELATION is a GO:0006323 (DNA packaging)
Timestamp Action Category Detail
Timestamp Action Category Detail
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:2 (Bacteria)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:28009 (Choanoflagellata)
2019-11-09 Added CONSTRAINT never_in_taxon NCBITaxon:2157 (Archaea)
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