This term is obsolete.

GO:1904108 JSON

protein localization to ciliary inversin compartment

Biological Process

Definition (GO:1904108 GONUTS page)

A process in which a protein is transported to, or maintained in, a location within a ciliary inversin compartment. PMID:25335890

471 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
protein localization in ciliary inversin compartment exact
protein localisation in ciliary inversin compartment exact
protein localisation to ciliary inversin compartment exact

Ancestor Chart

Ancestor chart for GO:1904108
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:1904108 protein localization to ciliary inversin compartment Never in Taxon 3176 Zygnematales
GO:1904108 protein localization to ciliary inversin compartment Never in Taxon 3312 Coniferophyta
GO:1904108 protein localization to ciliary inversin compartment Never in Taxon 3378 Gnetales
GO:1904108 protein localization to ciliary inversin compartment Never in Taxon 3398 Magnoliopsida
GO:1904108 protein localization to ciliary inversin compartment Never in Taxon 4890 Ascomycota
GO:1904108 protein localization to ciliary inversin compartment Never in Taxon 5782 Dictyostelium
GO:1904108 protein localization to ciliary inversin compartment Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P02650 10116 APOE_RAT GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P04639 10116 APOA1_RAT GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P08226 10090 APOE_MOUSE GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9325076
NOT-qualified manual protein Q00623 10090 APOA1_MOUSE GO:0008104 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:9325076

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:1904108 based on ALL annotations
The top 87 of 87 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein localization to ciliary inversin compartment
418,323.56 100.00 466 466
protein localization to T-tubule
382,942.97 73.60 368 402
regulation of cardiac muscle contraction
36,540.01 8.54 368 4,213
T-tubule
18,385.65 4.34 368 8,373
negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric
6,933.54 0.47 3 181
ecdysis, collagen and cuticulin-based cuticle
9,842.91 0.36 2 85
NAD+-protein poly-ADP-ribosyltransferase activity
1,474.80 0.35 201 57,013
positive regulation of telomere maintenance via telomere lengthening
2,865.23 0.33 3 438
negative regulation of telomere maintenance via telomere lengthening
2,681.56 0.32 3 468
embryonic heart tube left/right pattern formation
2,490.02 0.31 3 504
Totals 3029 181865093
No co-occurrence statistics for GO:1904108 based on MANUAL annotations
The top 26 of 26 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein localization to ciliary inversin compartment
11,743.63 100.00 110 110
protein localization to T-tubule
10,334.39 55.46 66 75
regulation of cardiac muscle contraction
5,741.33 36.87 66 135
T-tubule
2,370.27 17.79 66 327
cilium
450.25 3.83 109 2,843
ciliary inversin compartment
1,957.27 3.08 4 24
embryonic heart tube left/right pattern formation
733.98 1.94 3 48
kidney development
234.61 1.81 18 901
ecdysis, collagen and cuticulin-based cuticle
1,021.19 1.53 2 23
epithelial cilium movement involved in determination of left/right asymmetry
234.87 1.17 3 150
Totals 477 204249

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4890 (Ascomycota)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3398 (Magnoliopsida)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:5782 (Dictyostelium)
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3176 (Zygnematales)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3378 (Gnetales)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3312 (Coniferophyta)
2015-04-04 Added RELATION is a GO:0061512 (protein localization to cilium)
2015-04-04 Added SYNONYM protein localization in ciliary inversin compartment
2015-04-04 Added TERM protein localization to ciliary inversin compartment
Timestamp Action Category Detail
2015-04-04 Added TERM protein localization to ciliary inversin compartment
Timestamp Action Category Detail
2015-04-04 Added SYNONYM protein localization in ciliary inversin compartment
2015-04-04 Added SYNONYM protein localisation to ciliary inversin compartment
2015-04-04 Added DEFINITION A process in which a protein is transported to, or maintained in, a location within a ciliary inversin compartment.
2015-04-04 Added SYNONYM protein localisation in ciliary inversin compartment
Timestamp Action Category Detail
2015-04-04 Added RELATION is a GO:0061512 (protein localization to cilium)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4890 (Ascomycota)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3398 (Magnoliopsida)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:5782 (Dictyostelium)
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3176 (Zygnematales)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3378 (Gnetales)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:3312 (Coniferophyta)
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