This term is obsolete.

GO:1990612 JSON

Sad1-Kms1 LINC complex

Cellular Component

Definition (GO:1990612 GONUTS page)

A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair. PMID:24943839 PMID:24947240

2 annotations

Ancestor Chart

Ancestor chart for GO:1990612
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:1990612 Sad1-Kms1 LINC complex Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein O63264 4957 ZBI1_ZYGBI GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03879 559292 MBI4_YEAST GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03880 162425 ANI1_EMEND GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein P03882 559292 SCE1_YEAST GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein Q0H8X2 5270 BI1_MYCMD GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
IEA Review protein Q35127 367110 MBI1_NEUCR GO:0016020 Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012.
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2JW23 10116 A0A0G2JW23_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K8T1 10116 A0A0G2K8T1_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:1990612 based on ALL annotations
The top 30 of 30 co-occurring terms
Co-occurring Term PR S% #Together #Compared
Sad1-Kms1 LINC complex
99,077,430.00 100.00 2 2
meiotic attachment of telomeric heterochromatin to spindle pole body
7,076,959.50 6.67 1 14
centromere clustering at the mitotic interphase nuclear envelope
6,605,162.50 6.25 1 15
mitotic spindle pole body insertion into the nuclear envelope
2,677,768.50 2.63 1 37
inner plaque of mitotic spindle pole body
242,243.10 0.24 1 409
meiotic telomere clustering
137,036.56 0.14 1 723
new mitotic spindle pole body
118,513.67 0.12 1 836
old mitotic spindle pole body
108,996.07 0.11 1 909
meiotic spindle pole
100,586.23 0.10 1 985
spindle pole body-nuclear membrane anchor activity
85,559.09 0.09 1 1,158
Totals 40 92133371
No co-occurrence statistics for GO:1990612 based on MANUAL annotations
The top 22 of 22 co-occurring terms
Co-occurring Term PR S% #Together #Compared
Sad1-Kms1 LINC complex
705,766.50 100.00 2 2
meiotic attachment of telomeric heterochromatin to spindle pole body
141,153.30 16.67 1 5
mitotic spindle pole body insertion into the nuclear envelope
117,627.75 14.29 1 6
inner plaque of mitotic spindle pole body
100,823.79 12.50 1 7
centromere clustering at the mitotic interphase nuclear envelope
100,823.79 12.50 1 7
new mitotic spindle pole body
64,160.59 8.33 1 11
spindle pole body-nuclear membrane anchor activity
54,289.73 7.14 1 13
old mitotic spindle pole body
47,051.10 6.25 1 15
DNA double-strand break attachment to nuclear envelope
22,055.20 3.03 1 32
meiotic spindle pole
18,572.80 2.56 1 38
Totals 27 53829

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2022-06-20 Deleted RELATION is a GO:1990391 (DNA repair complex)
2019-12-12 Updated TERM Sad1-Kms1 LINC complex
2015-06-18 Added RELATION capable of part of GO:0006302 (double-strand break repair)
2015-01-23 Added RELATION is a GO:1990391 (DNA repair complex)
2015-01-23 Added RELATION is a GO:0034993 (meiotic nuclear membrane microtubule tethering complex)
2015-01-23 Added TERM Sad1-Kms2 LINC complex
2015-01-23 Added DEFINITION A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.
Timestamp Action Category Detail
2019-12-12 Updated TERM Sad1-Kms1 LINC complex
2015-01-23 Added TERM Sad1-Kms2 LINC complex
Timestamp Action Category Detail
2015-01-23 Added DEFINITION A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.
Timestamp Action Category Detail
2022-06-20 Deleted RELATION is a GO:1990391 (DNA repair complex)
2015-06-18 Added RELATION capable of part of GO:0006302 (double-strand break repair)
2015-01-23 Added RELATION is a GO:1990391 (DNA repair complex)
2015-01-23 Added RELATION is a GO:0034993 (meiotic nuclear membrane microtubule tethering complex)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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