GO:1990612
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Sad1-Kms1 LINC complex
Cellular Component
Definition (GO:1990612 GONUTS page)
A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair. PMID:24943839 PMID:24947240
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:1990612 | Sad1-Kms1 LINC complex | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
IEA Review | protein | O63264 | 4957 | ZBI1_ZYGBI | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
IEA Review | protein | P03879 | 559292 | MBI4_YEAST | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
IEA Review | protein | P03880 | 162425 | ANI1_EMEND | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
IEA Review | protein | P03882 | 559292 | SCE1_YEAST | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
IEA Review | protein | Q0H8X2 | 5270 | BI1_MYCMD | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
IEA Review | protein | Q35127 | 367110 | MBI1_NEUCR | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JW23 | 10116 | A0A0G2JW23_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K8T1 | 10116 | A0A0G2K8T1_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:1990612 based on ALL annotations
The top 30 of 30 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Sad1-Kms1 LINC complex
|
99,077,430.00 | 100.00 | 2 | 2 |
meiotic attachment of telomeric heterochromatin to spindle pole body
|
7,076,959.50 | 6.67 | 1 | 14 |
centromere clustering at the mitotic interphase nuclear envelope
|
6,605,162.50 | 6.25 | 1 | 15 |
mitotic spindle pole body insertion into the nuclear envelope
|
2,677,768.50 | 2.63 | 1 | 37 |
inner plaque of mitotic spindle pole body
|
242,243.10 | 0.24 | 1 | 409 |
meiotic telomere clustering
|
137,036.56 | 0.14 | 1 | 723 |
new mitotic spindle pole body
|
118,513.67 | 0.12 | 1 | 836 |
old mitotic spindle pole body
|
108,996.07 | 0.11 | 1 | 909 |
meiotic spindle pole
|
100,586.23 | 0.10 | 1 | 985 |
spindle pole body-nuclear membrane anchor activity
|
85,559.09 | 0.09 | 1 | 1,158 |
Totals | 40 | 92133371 |
No co-occurrence statistics for GO:1990612 based on MANUAL annotations
The top 22 of 22 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Sad1-Kms1 LINC complex
|
705,766.50 | 100.00 | 2 | 2 |
meiotic attachment of telomeric heterochromatin to spindle pole body
|
141,153.30 | 16.67 | 1 | 5 |
mitotic spindle pole body insertion into the nuclear envelope
|
117,627.75 | 14.29 | 1 | 6 |
inner plaque of mitotic spindle pole body
|
100,823.79 | 12.50 | 1 | 7 |
centromere clustering at the mitotic interphase nuclear envelope
|
100,823.79 | 12.50 | 1 | 7 |
new mitotic spindle pole body
|
64,160.59 | 8.33 | 1 | 11 |
spindle pole body-nuclear membrane anchor activity
|
54,289.73 | 7.14 | 1 | 13 |
old mitotic spindle pole body
|
47,051.10 | 6.25 | 1 | 15 |
DNA double-strand break attachment to nuclear envelope
|
22,055.20 | 3.03 | 1 | 32 |
meiotic spindle pole
|
18,572.80 | 2.56 | 1 | 38 |
Totals | 27 | 53829 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2022-06-20 | Deleted | RELATION | is a GO:1990391 (DNA repair complex) |
2019-12-12 | Updated | TERM | Sad1-Kms1 LINC complex |
2015-06-18 | Added | RELATION | capable of part of GO:0006302 (double-strand break repair) |
2015-01-23 | Added | RELATION | is a GO:1990391 (DNA repair complex) |
2015-01-23 | Added | RELATION | is a GO:0034993 (meiotic nuclear membrane microtubule tethering complex) |
2015-01-23 | Added | TERM | Sad1-Kms2 LINC complex |
2015-01-23 | Added | DEFINITION | A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-12-12 | Updated | TERM | Sad1-Kms1 LINC complex |
2015-01-23 | Added | TERM | Sad1-Kms2 LINC complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-01-23 | Added | DEFINITION | A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-20 | Deleted | RELATION | is a GO:1990391 (DNA repair complex) |
2015-06-18 | Added | RELATION | capable of part of GO:0006302 (double-strand break repair) |
2015-01-23 | Added | RELATION | is a GO:1990391 (DNA repair complex) |
2015-01-23 | Added | RELATION | is a GO:0034993 (meiotic nuclear membrane microtubule tethering complex) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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