This term is obsolete.

GO:1990826 JSON

nucleoplasmic periphery of the nuclear pore complex

Cellular Component

Definition (GO:1990826 GONUTS page)

Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex. PMID:10633080

2 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
associated with the nuclear pore related

Ancestor Chart

Ancestor chart for GO:1990826
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:1990826 nucleoplasmic periphery of the nuclear pore complex Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2JW23 10116 A0A0G2JW23_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K8T1 10116 A0A0G2K8T1_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1B0GR71 10090 A0A1B0GR71_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1B0GRK6 10090 A0A1B0GRK6_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1D8PHF8 237561 A0A1D8PHF8_CANAL GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y8H4 10116 A0A8I5Y8H4_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A0E5 10116 A0A8I6A0E5_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:1990826 based on ALL annotations
The top 58 of 58 co-occurring terms
Co-occurring Term PR S% #Together #Compared
nucleoplasmic periphery of the nuclear pore complex
97,469,390.00 100.00 2 2
deaminase binding
48,734,696.00 33.33 1 2
negative regulation of mRNA modification
12,183,674.00 11.11 1 8
telomeric repeat-containing RNA binding
637,054.90 0.65 1 153
cellular response to sodium arsenite
244,897.95 0.25 1 398
DNA/DNA annealing activity
198,917.12 0.20 1 490
positive regulation of action potential
190,369.90 0.19 1 512
pronucleus
167,185.92 0.17 1 583
cellular response to potassium ion
115,212.05 0.12 1 846
negative regulation of telomere maintenance via telomerase
51,071.20 0.05 2 3,817
Totals 70 79810253
No co-occurrence statistics for GO:1990826 based on MANUAL annotations
The top 56 of 56 co-occurring terms
Co-occurring Term PR S% #Together #Compared
nucleoplasmic periphery of the nuclear pore complex
645,899.50 100.00 2 2
deaminase binding
322,949.75 33.33 1 2
negative regulation of mRNA modification
129,179.90 16.67 1 5
telomeric repeat-containing RNA binding
80,737.44 11.11 1 8
DNA/DNA annealing activity
30,757.12 4.55 1 21
cellular response to sodium arsenite
24,842.29 3.70 1 26
positive regulation of action potential
22,272.40 3.33 1 29
cellular response to potassium ion
11,136.20 1.69 1 58
RNA metabolic process
9,498.52 1.45 1 68
pronucleus
9,097.18 1.39 1 71
Totals 66 648939

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2021-07-10 Added SYNONYM associated with the nuclear pore
2019-09-12 Added RELATION part of GO:0005654 (nucleoplasm)
2019-09-12 Deleted RELATION is a GO:0044451 (obsolete nucleoplasm part)
2019-09-12 Added RELATION is a GO:0110165 (cellular anatomical structure)
2015-08-23 Added DEFINITION Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex.
2015-08-23 Added RELATION is a GO:0044451 (obsolete nucleoplasm part)
2015-08-23 Added TERM nucleoplasmic periphery of the nuclear pore complex
Timestamp Action Category Detail
2015-08-23 Added TERM nucleoplasmic periphery of the nuclear pore complex
Timestamp Action Category Detail
2021-07-10 Added SYNONYM associated with the nuclear pore
2015-08-23 Added DEFINITION Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex.
Timestamp Action Category Detail
2019-09-12 Added RELATION part of GO:0005654 (nucleoplasm)
2019-09-12 Deleted RELATION is a GO:0044451 (obsolete nucleoplasm part)
2019-09-12 Added RELATION is a GO:0110165 (cellular anatomical structure)
2015-08-23 Added RELATION is a GO:0044451 (obsolete nucleoplasm part)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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