GO:1990826
JSON
nucleoplasmic periphery of the nuclear pore complex
Cellular Component
Definition (GO:1990826 GONUTS page)
Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex. PMID:10633080
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
associated with the nuclear pore | related |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:1990826 | nucleoplasmic periphery of the nuclear pore complex | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JW23 | 10116 | A0A0G2JW23_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K8T1 | 10116 | A0A0G2K8T1_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1B0GR71 | 10090 | A0A1B0GR71_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1B0GRK6 | 10090 | A0A1B0GRK6_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1D8PHF8 | 237561 | A0A1D8PHF8_CANAL | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y8H4 | 10116 | A0A8I5Y8H4_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A0E5 | 10116 | A0A8I6A0E5_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:1990826 based on ALL annotations
The top 58 of 58 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nucleoplasmic periphery of the nuclear pore complex
|
97,469,390.00 | 100.00 | 2 | 2 |
deaminase binding
|
48,734,696.00 | 33.33 | 1 | 2 |
negative regulation of mRNA modification
|
12,183,674.00 | 11.11 | 1 | 8 |
telomeric repeat-containing RNA binding
|
637,054.90 | 0.65 | 1 | 153 |
cellular response to sodium arsenite
|
244,897.95 | 0.25 | 1 | 398 |
DNA/DNA annealing activity
|
198,917.12 | 0.20 | 1 | 490 |
positive regulation of action potential
|
190,369.90 | 0.19 | 1 | 512 |
pronucleus
|
167,185.92 | 0.17 | 1 | 583 |
cellular response to potassium ion
|
115,212.05 | 0.12 | 1 | 846 |
negative regulation of telomere maintenance via telomerase
|
51,071.20 | 0.05 | 2 | 3,817 |
Totals | 70 | 79810253 |
No co-occurrence statistics for GO:1990826 based on MANUAL annotations
The top 56 of 56 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nucleoplasmic periphery of the nuclear pore complex
|
645,899.50 | 100.00 | 2 | 2 |
deaminase binding
|
322,949.75 | 33.33 | 1 | 2 |
negative regulation of mRNA modification
|
129,179.90 | 16.67 | 1 | 5 |
telomeric repeat-containing RNA binding
|
80,737.44 | 11.11 | 1 | 8 |
DNA/DNA annealing activity
|
30,757.12 | 4.55 | 1 | 21 |
cellular response to sodium arsenite
|
24,842.29 | 3.70 | 1 | 26 |
positive regulation of action potential
|
22,272.40 | 3.33 | 1 | 29 |
cellular response to potassium ion
|
11,136.20 | 1.69 | 1 | 58 |
RNA metabolic process
|
9,498.52 | 1.45 | 1 | 68 |
pronucleus
|
9,097.18 | 1.39 | 1 | 71 |
Totals | 66 | 648939 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2021-07-10 | Added | SYNONYM | associated with the nuclear pore |
2019-09-12 | Added | RELATION | part of GO:0005654 (nucleoplasm) |
2019-09-12 | Deleted | RELATION | is a GO:0044451 (obsolete nucleoplasm part) |
2019-09-12 | Added | RELATION | is a GO:0110165 (cellular anatomical structure) |
2015-08-23 | Added | DEFINITION | Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex. |
2015-08-23 | Added | RELATION | is a GO:0044451 (obsolete nucleoplasm part) |
2015-08-23 | Added | TERM | nucleoplasmic periphery of the nuclear pore complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-08-23 | Added | TERM | nucleoplasmic periphery of the nuclear pore complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-07-10 | Added | SYNONYM | associated with the nuclear pore |
2015-08-23 | Added | DEFINITION | Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-09-12 | Added | RELATION | part of GO:0005654 (nucleoplasm) |
2019-09-12 | Deleted | RELATION | is a GO:0044451 (obsolete nucleoplasm part) |
2019-09-12 | Added | RELATION | is a GO:0110165 (cellular anatomical structure) |
2015-08-23 | Added | RELATION | is a GO:0044451 (obsolete nucleoplasm part) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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