GO:1990875
JSON
nucleoplasmic side of nuclear pore
Cellular Component
Definition (GO:1990875 GONUTS page)
The side of the nuclear pore complex (NPC) that faces the nucleoplasm. PMID:8422679
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
nucleoplasmic side of NPC | exact |
nucleoplasmic side of nuclear pore complex | exact |
nucleoplasmic side of nucleopore | exact |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:1990875 | nucleoplasmic side of nuclear pore | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JW23 | 10116 | A0A0G2JW23_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K8T1 | 10116 | A0A0G2K8T1_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1B0GR71 | 10090 | A0A1B0GR71_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1B0GRK6 | 10090 | A0A1B0GRK6_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1D8PHF8 | 237561 | A0A1D8PHF8_CANAL | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y8H4 | 10116 | A0A8I5Y8H4_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A0E5 | 10116 | A0A8I6A0E5_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:1990875 based on ALL annotations
The top 29 of 29 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nucleoplasmic side of nuclear pore
|
198,154,860.00 | 100.00 | 1 | 1 |
negative regulation of RNA export from nucleus
|
649,688.06 | 0.33 | 1 | 305 |
annulate lamellae
|
469,561.25 | 0.24 | 1 | 422 |
nuclear inclusion body
|
189,803.52 | 0.10 | 1 | 1,044 |
amyloid fibril formation
|
164,171.39 | 0.08 | 1 | 1,207 |
nuclear pore complex assembly
|
130,022.88 | 0.07 | 1 | 1,524 |
molecular condensate scaffold activity
|
55,692.77 | 0.03 | 1 | 3,558 |
nuclear pore nuclear basket
|
46,878.37 | 0.02 | 1 | 4,227 |
nuclear periphery
|
10,558.12 | 0.01 | 1 | 18,768 |
nuclear localization sequence binding
|
10,319.49 | 0.01 | 1 | 19,202 |
Totals | 29 | 90262668 |
No co-occurrence statistics for GO:1990875 based on MANUAL annotations
The top 25 of 25 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
nucleoplasmic side of nuclear pore
|
1,411,533.00 | 100.00 | 1 | 1 |
negative regulation of RNA export from nucleus
|
117,627.75 | 8.33 | 1 | 12 |
annulate lamellae
|
45,533.32 | 3.23 | 1 | 31 |
nuclear inclusion body
|
24,336.78 | 1.72 | 1 | 58 |
nuclear pore complex assembly
|
22,055.20 | 1.56 | 1 | 64 |
amyloid fibril formation
|
12,168.39 | 0.86 | 1 | 116 |
nuclear pore nuclear basket
|
7,629.91 | 0.54 | 1 | 185 |
molecular condensate scaffold activity
|
5,247.33 | 0.37 | 1 | 269 |
nuclear periphery
|
2,714.49 | 0.19 | 1 | 520 |
RNA export from nucleus
|
1,578.90 | 0.11 | 1 | 894 |
Totals | 25 | 162409 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2019-09-12 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2019-09-12 | Added | RELATION | is a GO:0110165 (cellular anatomical structure) |
2015-10-08 | Added | DEFINITION | The side of the nuclear pore complex (NPC) that faces the nucleoplasm. |
2015-10-08 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2015-10-08 | Added | RELATION | part of GO:0005643 (nuclear pore) |
2015-10-08 | Added | SYNONYM | nucleoplasmic side of nucleopore |
2015-10-08 | Added | SYNONYM | nucleoplasmic side of NPC |
2015-10-08 | Added | SYNONYM | nucleoplasmic side of nuclear pore complex |
2015-10-08 | Added | TERM | nucleoplasmic side of nuclear pore |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-10-08 | Added | TERM | nucleoplasmic side of nuclear pore |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-10-08 | Added | DEFINITION | The side of the nuclear pore complex (NPC) that faces the nucleoplasm. |
2015-10-08 | Added | SYNONYM | nucleoplasmic side of nucleopore |
2015-10-08 | Added | SYNONYM | nucleoplasmic side of NPC |
2015-10-08 | Added | SYNONYM | nucleoplasmic side of nuclear pore complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-09-12 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2019-09-12 | Added | RELATION | is a GO:0110165 (cellular anatomical structure) |
2015-10-08 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2015-10-08 | Added | RELATION | part of GO:0005643 (nuclear pore) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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