GO:1990955
JSON
G-rich single-stranded DNA binding
Molecular Function
Definition (GO:1990955 GONUTS page)
Binding to G-rich, single-stranded DNA. PMID:8493094
Ancestor Chart
Ancestor chart for GO:1990955
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Considerations when annotating from ChiP assay results | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
IEA Review | protein | P40999 | 284812 | PMT1M_SCHPO | GO:0003677 | To remove over-annotation from InterPro entries IPR001525 and IPR018117; for this particular C5-methyltransferase family member, there is a Ser residue in the active site that may be responsible. Reported by InterPro on 19-10-2012 | |
NOT-qualified manual | protein | A0A0G2K0G0 | 10116 | A0A0G2K0G0_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K6Q9 | 10116 | A0A0G2K6Q9_RAT | GO:0003697 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1B0GWQ8 | 10116 | A0A1B0GWQ8_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y5Z6 | 10116 | A0A8I5Y5Z6_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5ZKC5 | 10116 | A0A8I5ZKC5_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A2T0 | 10116 | A0A8I6A2T0_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A7B9 | 10116 | A0A8I6A7B9_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6AB42 | 10116 | A0A8I6AB42_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6ASJ7 | 10116 | A0A8I6ASJ7_RAT | GO:0003677 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:1990955 based on ALL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
G-rich single-stranded DNA binding
|
2,108,030.50 | 100.00 | 94 | 94 |
positive regulation of DNA strand elongation
|
2,108,030.50 | 97.87 | 92 | 92 |
positive regulation of telomeric D-loop disassembly
|
2,108,030.50 | 93.62 | 88 | 88 |
telomere assembly
|
808,078.40 | 38.02 | 92 | 240 |
8-hydroxy-2'-deoxyguanosine DNA binding
|
710,398.56 | 33.45 | 92 | 273 |
telomeric D-loop binding
|
578,921.80 | 27.30 | 92 | 335 |
establishment of protein localization to telomere
|
341,441.56 | 16.14 | 92 | 568 |
DEAD/H-box RNA helicase binding
|
257,213.27 | 12.17 | 92 | 754 |
regulation of double-strand break repair via nonhomologous end joining
|
227,895.19 | 10.79 | 92 | 851 |
telomeric D-loop disassembly
|
144,192.42 | 6.83 | 92 | 1,345 |
Totals | 2562 | 179834214 |
No co-occurrence statistics for GO:1990955 based on MANUAL annotations
The top 54 of 54 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
G-rich single-stranded DNA binding
|
201,647.58 | 100.00 | 7 | 7 |
positive regulation of DNA strand elongation
|
201,647.58 | 71.43 | 5 | 5 |
8-hydroxy-2'-deoxyguanosine DNA binding
|
91,657.99 | 38.46 | 5 | 11 |
telomere assembly
|
84,019.82 | 35.71 | 5 | 12 |
telomeric G-quadruplex DNA binding
|
84,019.82 | 35.71 | 5 | 12 |
telomeric D-loop binding
|
72,016.99 | 31.25 | 5 | 14 |
establishment of protein localization to telomere
|
42,009.91 | 19.23 | 5 | 24 |
positive regulation of telomeric D-loop disassembly
|
201,647.58 | 14.29 | 1 | 1 |
regulation of double-strand break repair via nonhomologous end joining
|
26,532.58 | 12.50 | 5 | 38 |
telomeric D-loop disassembly
|
21,451.87 | 10.20 | 5 | 47 |
Totals | 175 | 656197 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Added | DEFINITION | Binding to G-rich, single-stranded DNA. |
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with G-rich, single-stranded DNA. |
2016-05-18 | Added | RELATION | is a GO:0003697 (single-stranded DNA binding) |
2016-05-18 | Added | DEFINITION | Interacting selectively and non-covalently with G-rich, single-stranded DNA. |
2016-05-18 | Added | TERM | G-rich single-stranded DNA binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2016-05-18 | Added | TERM | G-rich single-stranded DNA binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Added | DEFINITION | Binding to G-rich, single-stranded DNA. |
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with G-rich, single-stranded DNA. |
2016-05-18 | Added | DEFINITION | Interacting selectively and non-covalently with G-rich, single-stranded DNA. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2016-05-18 | Added | RELATION | is a GO:0003697 (single-stranded DNA binding) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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