This term is obsolete.

GO:1990955 JSON

G-rich single-stranded DNA binding

Molecular Function

Definition (GO:1990955 GONUTS page)

Binding to G-rich, single-stranded DNA. PMID:8493094

94 annotations

Ancestor Chart

Ancestor chart for GO:1990955
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Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link
Considerations when annotating from ChiP assay results Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein P40999 284812 PMT1M_SCHPO GO:0003677 To remove over-annotation from InterPro entries IPR001525 and IPR018117; for this particular C5-methyltransferase family member, there is a Ser residue in the active site that may be responsible. Reported by InterPro on 19-10-2012
NOT-qualified manual protein A0A0G2K0G0 10116 A0A0G2K0G0_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K6Q9 10116 A0A0G2K6Q9_RAT GO:0003697 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1B0GWQ8 10116 A0A1B0GWQ8_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y5Z6 10116 A0A8I5Y5Z6_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5ZKC5 10116 A0A8I5ZKC5_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2T0 10116 A0A8I6A2T0_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A7B9 10116 A0A8I6A7B9_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AB42 10116 A0A8I6AB42_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6ASJ7 10116 A0A8I6ASJ7_RAT GO:0003677 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:1990955 based on ALL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term PR S% #Together #Compared
G-rich single-stranded DNA binding
2,108,030.50 100.00 94 94
positive regulation of DNA strand elongation
2,108,030.50 97.87 92 92
positive regulation of telomeric D-loop disassembly
2,108,030.50 93.62 88 88
telomere assembly
808,078.40 38.02 92 240
8-hydroxy-2'-deoxyguanosine DNA binding
710,398.56 33.45 92 273
telomeric D-loop binding
578,921.80 27.30 92 335
establishment of protein localization to telomere
341,441.56 16.14 92 568
DEAD/H-box RNA helicase binding
257,213.27 12.17 92 754
regulation of double-strand break repair via nonhomologous end joining
227,895.19 10.79 92 851
telomeric D-loop disassembly
144,192.42 6.83 92 1,345
Totals 2562 179834214
No co-occurrence statistics for GO:1990955 based on MANUAL annotations
The top 54 of 54 co-occurring terms
Co-occurring Term PR S% #Together #Compared
G-rich single-stranded DNA binding
201,647.58 100.00 7 7
positive regulation of DNA strand elongation
201,647.58 71.43 5 5
8-hydroxy-2'-deoxyguanosine DNA binding
91,657.99 38.46 5 11
telomere assembly
84,019.82 35.71 5 12
telomeric G-quadruplex DNA binding
84,019.82 35.71 5 12
telomeric D-loop binding
72,016.99 31.25 5 14
establishment of protein localization to telomere
42,009.91 19.23 5 24
positive regulation of telomeric D-loop disassembly
201,647.58 14.29 1 1
regulation of double-strand break repair via nonhomologous end joining
26,532.58 12.50 5 38
telomeric D-loop disassembly
21,451.87 10.20 5 47
Totals 175 656197

Change Log

Timestamp Action Category Detail
2021-05-24 Added DEFINITION Binding to G-rich, single-stranded DNA.
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with G-rich, single-stranded DNA.
2016-05-18 Added RELATION is a GO:0003697 (single-stranded DNA binding)
2016-05-18 Added DEFINITION Interacting selectively and non-covalently with G-rich, single-stranded DNA.
2016-05-18 Added TERM G-rich single-stranded DNA binding
Timestamp Action Category Detail
2016-05-18 Added TERM G-rich single-stranded DNA binding
Timestamp Action Category Detail
2021-05-24 Added DEFINITION Binding to G-rich, single-stranded DNA.
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with G-rich, single-stranded DNA.
2016-05-18 Added DEFINITION Interacting selectively and non-covalently with G-rich, single-stranded DNA.
Timestamp Action Category Detail
2016-05-18 Added RELATION is a GO:0003697 (single-stranded DNA binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
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