ID   AB011404; SV 1; linear; genomic RNA; STD; VRL; 1306 BP.
XX
AC   AB011404;
XX
DT   15-MAR-1998 (Rel. 55, Created)
DT   22-MAR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Calanthe mild mosaic potyvirus RNA for polyprotein (NIb/CP region), partial
DE   cds.
XX
KW   NIb polymerase; polyprotein.
XX
OS   Calanthe mild mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1306
RA   Kondo H.;
RT   ;
RL   Submitted (20-FEB-1998) to the INSDC.
RL   Hideki Kondo, Research Institute for Bioresources, Okayama University,
RL   Laboratory of Plant Pathology; Chuo 2-20-1, Kurashiki, Okayama, 710-0046,
RL   Japan (E-mail:hkondo@rib.okayama-u.ac.jp, Tel:+81-86-434-1232,
RL   Fax:+81-86-434-1249)
XX
RN   [2]
RA   Gara I.W., Kondo H., Maeda T., Tamada T., Inouye N.;
RT   "Calanthe mild mosaic virus, a new potyvirus from Calanthe Orchid";
RL   J. Phytopathol. 146:357-363(1998).
XX
DR   MD5; d8a82ab2281b94658d83016d96cd7bb7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1306
FT                   /organism="Calanthe mild mosaic virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:73840"
FT   CDS             <1..1140
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="coding region for CP and a part of NIb"
FT                   /db_xref="GOA:O70792"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O70792"
FT                   /protein_id="BAA25144.1"
FT                   /translation="FIPKLDQERIVSILEWDRSKEISHRAEAICAAMIEAWGYSELLTE
FT                   IRRFYDWLMDLPEFRDLANCGVFPYISETALRKLYTNKDAHMDELEAYYKAMNVEDEGE
FT                   FDIVTLQGDKSELDAGLSAEKKNTSDLSKALSSDASGSKEKDVDTGSRGNPVPRLKSMG
FT                   RKMKLPKIGKEVTLNLEHLLEYKPEQEDLSNARATHKQFGIWHRTIMEELDITEEQMKV
FT                   VMNGFMVWCIENGTSPNINGVWTMMDGEEQVEFPIKPFVENAKPTLRQIMHHFSDAAEA
FT                   YIEFRNAERSYIPRYALIRNLRDSSLARFAFDFYEMNSKTPTRAREAHLQMKAAALANV
FT                   STRMFGLDGNIATQEENTERHIATDVNTNMHTLNGARYM"
FT   mat_peptide     <1..333
FT                   /gene="NIb"
FT                   /product="NIb polymerase"
FT   mat_peptide     334..1137
FT                   /gene="CP"
FT                   /product="coat protein"
FT   polyA_site      1306
XX
SQ   Sequence 1306 BP; 418 A; 228 C; 334 G; 326 T; 0 other;
     ttcattccga aactggatca ggagcgaatc gtctcaatac ttgagtggga taggagtaaa        60
     gaaataagtc acagagcaga ggcaatttgt gcggcgatga ttgaagcatg gggttacagc       120
     gaactactca cggagattcg tcgattctat gattggctta tggatttacc agaattccga       180
     gacttagcaa attgtggggt ttttccatac atttcagaga ctgcactgcg gaagttgtac       240
     acgaacaaag atgcacacat ggatgaactt gaggcatatt ataaagcgat gaatgttgag       300
     gatgaaggag agtttgatat tgtcacgctt caaggggaca agagtgagtt ggatgctgga       360
     ctcagtgctg agaagaagaa cactagcgat ttgagtaaag cgctatcgag tgatgctagt       420
     gggagtaaag aaaaggatgt cgacacagga agtcgaggca atccagtgcc gcgcttaaag       480
     tcaatgggta ggaaaatgaa actacccaaa attggaaaag aagttacctt gaacttggaa       540
     cacctgttgg aatataaacc cgagcaagag gatttgtcaa atgcgagagc tacacacaag       600
     caatttggga tttggcatcg aacaataatg gaggagctgg acataactga agagcaaatg       660
     aaagtcgtga tgaatgggtt tatggtttgg tgcatcgaga atgggacatc tccaaacatc       720
     aatggagttt ggactatgat ggatggagaa gagcaagttg agttcccaat caaacctttt       780
     gttgagaatg caaaaccaac attaaggcaa atcatgcacc atttctcaga tgctgcagaa       840
     gcatacattg aattcagaaa tgctgagcgt tcatacatac cacgatatgc gctcatcagg       900
     aacttgcgag atagcagcct tgcacgattt gcattcgact tttacgagat gaattcgaaa       960
     actccaacac gcgctcgaga ggcgcatcta caaatgaagg cggcagcatt agccaatgtt      1020
     agcaccagaa tgtttggact ggatggtaat atagcaacgc aggaggagaa cacggagaga      1080
     cacatagcca cggatgtgaa cacgaatatg cacacactca atggtgcccg ctatatgtga      1140
     ataagtaaga ttaacttatg tgcgtgtttt tatgtttgtt attgtagtat tataaatgtt      1200
     agtgtgagat gctcaccttt ttaaatatta tcgtaaccaa aggactacta gcccggttct      1260
     cctaagtgtg gttgtccacg tggtgaagcg gttagtatac accttt                     1306
//