ID AB096214; SV 1; linear; genomic RNA; STD; VRL; 3050 BP. XX AC AB096214; XX DT 04-MAR-2003 (Rel. 75, Created) DT 19-FEB-2009 (Rel. 99, Last updated, Version 4) XX DE Cucumber mosaic virus genes for RNA-dependent-RNA polymerase, 2b protein, DE complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3050 RA Choi S.K., Ryu K.H., Palukaitis P., Park W.M., Yoon J.Y.; RT ; RL Submitted (18-NOV-2002) to the INSDC. RL Contact:Seung Kook Choi Korea University, Graduate School of Biotechnology; RL 5 ga 1, anamdong sungbukku, Seoul 136-701, South Korea XX RN [2] RA Choi S.K., Park W.M., Palukaitis P., Ryu K.H.; RT "Replicase and Movement protein are symptom determinants in zucchini RT squash"; RL Unpublished. XX DR MD5; 3e64d9e1f2532646d1369b581178bda4. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3050 FT /organism="Cucumber mosaic virus" FT /strain="Pf" FT /isolate="Pf" FT /mol_type="genomic RNA" FT /country="USA:Florida" FT /isolation_source="Pepper plant" FT /note="laboratory host: Tobacco" FT /db_xref="taxon:12305" FT CDS 87..2660 FT /codon_start=1 FT /transl_table=1 FT /product="RNA-dependent-RNA polymerase" FT /db_xref="GOA:Q80IV0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q80IV0" FT /protein_id="BAC58118.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDVHSLRTPDGAPAEAVSGEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EADDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIATPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVRNKYCLEID FT LSKFDKSQGEFHLLIQEHILNGLGRPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYRKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCNTEFRVERVNSNKQRKKYGIERRCDDKRRTPTGSYGGGEEAETKVSQTESTG FT TRSQKSQRESAFKSQTIPLLTVLSSRWFGIDRVMPPCERGGVTRV" FT CDS 2419..2751 FT /codon_start=1 FT /transl_table=1 FT /product="2b protein" FT /note="overlapping protein responsible for virus movement FT and virus pathogenicity" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q80IU9" FT /protein_id="BAC58119.1" FT /translation="MELNAGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHVNVAELPESEASRLELLAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3050 BP; 768 A; 680 C; 710 G; 892 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagtctga 60 aaacttttct ttctagtatc ttttctatgg ctttccctgc ccccgcattc tcactggcca 120 atcttttgaa cggcagttac ggtgtcgaca ctcccgagga tgtggaacgt ttgcgatctg 180 agcaacgtga agaggctgct gcggcctgtc gtaattacag gcccctaccc gctgtggatg 240 tcagcgagag tgtcacagag gacgtgcatt ccctccgaac tcccgacgga gctcccgctg 300 aagcggtgtc tggtgagttt gtaacttatg gtgctgaaga ttaccttgaa aaatctgatg 360 atgagctcct tgtcgctttt gagacgatgg tcaaacccat gcgtatcgga caactatggt 420 gccctgcgtt taataaatgt tcttttattt ccagcattgc tatggccaga gctttgttgt 480 tggcacctag aacatcccac cgaaccatga agtgttttga agacctggtc gcggctattt 540 acactaaatc tgatttctac tacagtgaag agtgtgaagc cgacgacgct cagatagata 600 tctcgtctcg cgatgtaccc ggttattctt tcgaaccgtg gtcccgaacg tctggatttg 660 aaccgccgcc catttgtgaa gcgtgcgaca tgatcatgta ccagtgcccg tgttttgatt 720 ttaatgcttt aaagaaatcg tgcgctgaga ggaccttcgc tgatgattat gttattgaag 780 gtttagatgg tgttgttgat aatgcgactc tgttgtcgaa tttgggtcca tttttggtac 840 ctgtgaagtg tcaatatgaa aaatgtccaa cgccaaccat cgcgactcct ccggatttaa 900 accgtgctac tgatcgtgtt gatatcaatt tagttcaatc catttgtgac tcgactctgc 960 ccactcatag taactacgac gactcctttc atcaagtgtt cgtcgaaagt gcagactatt 1020 ctatagatct ggatcatgtt agacttcgac agtctgatct tattgcaaaa attccagatt 1080 cagggcatat gataccggtt ctgaataccg ggagcggtca caagagagta ggtacgacga 1140 aggaggtcct tacagcaatt aagaaacgta atgctgacgt tccagagcta ggtgattccg 1200 ttaatctgtc tagattgagt aaagctgtgg ctgagagatt cttcatttca tacatcaatg 1260 gtaactctct agcatccagt aactttgtca atgtcgttag taacttccac gattacatgg 1320 aaaagtggaa gtcctcaggt ctttcttatg atgatcttcc ggatcttcat gctgagaatt 1380 tgcagtttta tgaccacatg ataaaatccg atgtgaaacc tgtagtgagc gacacactca 1440 atatcgacag accggttcca gctactataa cgtaccataa gaaaagtata acctcccagt 1500 tctcaccgtt attcacagcg ctattcgagc gcttccagag atgccttcga gaacgtatta 1560 ttcttcctgt tggtaagatt tcatcccttg agatggcagg atttgatgtc aggaacaaat 1620 actgccttga gattgatctg tccaagtttg ataagtctca gggtgaattt cacttgctaa 1680 tccaggaaca cattttgaat ggtctaggac gtccagctcc gataactaag tggtggtgtg 1740 atttccatcg attctcttat attagagacc gtagagctgg tgttggtatg cctattagtt 1800 tccagagacg aactggcgat gcattcactt attttggcaa taccatcgtc accatggctg 1860 agtttgcctg gtgttatgac accgaccaat tcgaaaagct tttattctca ggcgatgatt 1920 ctctaggatt ttcactgctt ccccctgttg gtgacccgag taaattcaca actcttttca 1980 acatggaagc taaggtgatg gaacctgccg tgccatatat ttgttcgaag ttcttactct 2040 ctgacgagtt cggtaacaca ttttccgttc cagatccatt gcgcgaggtt cagcggttag 2100 gaacaaagaa aattccctat tctgacaatg atgaattctt gtttgctcac ttcatgagct 2160 ttgttgatcg gttgaagttt ttggatcgaa tgtctcagtc gtgtatcgat caactttcaa 2220 ttttcttcga attgaaatac aggaagtctg gggaagaggc tgctttaatg ttaggcgcct 2280 ttaagaagta taccgctaat ttccagtcct acaaagaact ctattattca gatcgtcgtc 2340 aatgcgaatt gatcaattcg ttttgtaata cagagttcag ggttgagcgt gtaaattcca 2400 acaaacagcg aaagaaatat ggaattgaac gcaggtgcga tgacaaacgt cgaactccaa 2460 ctggctcgta tggtggaggc gaagaagcag agacgaaggt ctcacaaaca gaatcgacgg 2520 gaacgaggtc acaaaagtcc cagcgagaga gcgcgttcaa atctcagact attccgcttc 2580 ttaccgttct atcaagtaga tggttcggaa ttgacagggt catgccgcca tgtgaacgtg 2640 gcggagttac ccgagtctga ggcctctcgt ttagagttat tggcggaaga ccatgatttt 2700 gacgatacag attggttcgc cggtaacgaa tgggcggaag gtgctttctg aaacctcccc 2760 ttccgcatct ccctccggtt ttctgtggcg ggagctgagt tggcagtatt gctataaact 2820 gtctgaagtc actaaacaca ttgtggtgaa cgggttgtcc atccagctta cggctaaaat 2880 ggtcagtcgt ggagaaatct acgccagcag acttacaagt ctctgaggca cctttgaaac 2940 catctcctag gtttcttcgg aaggacttcg gtccgtgtac ttctagcaca acgtgctagt 3000 ttcagggtac gggtgccccc cacttttgtg gggcctctaa aaggagacca 3050 //