ID AB116630; SV 1; linear; genomic DNA; STD; VRL; 2774 BP. XX AC AB116630; XX DT 20-JAN-2004 (Rel. 78, Created) DT 03-JUN-2010 (Rel. 105, Last updated, Version 5) XX DE Tomato yellow leaf curl virus-Israel [Japan:Omura:Eustoma] DNA, complete DE genome. XX KW . XX OS Tomato yellow leaf curl virus-Israel [Japan:Omura:Eustoma] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2774 RA Ueda S., Kimura T., Onuki M., Hanada K., Iwanami T.; RT ; RL Submitted (07-AUG-2003) to the INSDC. RL Contact:Shigenori Ueda National Agricultural Institute for Kyushu Okinawa RL Region; 1823 Mii, Kurume, Fukuoka 839-8503, Japan XX RN [2] RA Ueda S., Kimura T., Onuki M., Hanada K., Iwanami T.; RT "Three distinct groups of isolates of Tomato yellow leaf curl virus in RT Japan and construction of an infectious clone"; RL J. Gen. Plant Pathol. 70:232-238(2004). XX DR MD5; f7800cd269c8b44e7d82d74f235ea2e0. DR EuropePMC; PMC2224568; 17977971. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="Tomato yellow leaf curl virus-Israel FT [Japan:Omura:Eustoma]" FT /host="Eustoma russellianum" FT /strain="Omu" FT /mol_type="genomic DNA" FT /country="Japan:Nagasaki, Omura" FT /note="TYLCV-IL[JR:Omu:Eus]" FT /db_xref="taxon:503399" FT CDS 307..657 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:Q764H4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q764H4" FT /protein_id="BAD07420.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT CDS 467..1243 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q764H3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q764H3" FT /protein_id="BAD07421.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1240..1644) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3" FT /db_xref="GOA:Q764H2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q764H2" FT /protein_id="BAD07422.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRSVDHVLYDVLENTINVTETHDIKYKFY" FT CDS complement(1385..1792) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2" FT /db_xref="GOA:Q764H1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q764H1" FT /protein_id="BAD07423.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGHGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1701..2774) FT /codon_start=1 FT /transl_table=1 FT /gene="Rep" FT /product="replication-associated protein" FT /db_xref="GOA:Q764H0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q764H0" FT /protein_id="BAD07424.1" FT /translation="MPRLFNIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT KELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWTLKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT CDS complement(2330..2623) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q764G9" FT /protein_id="BAD07425.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY" XX SQ Sequence 2774 BP; 753 A; 533 C; 609 G; 879 T; 0 other; gttgaaatga atcggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg tgtcttactt 60 atacctggac acctaatggc tatttggtaa tttcatgaat gttcattgta attcaaaatt 120 caaaaatcaa atcattaaag cggccatccg tataatatta ccggatggcc gcgccttttc 180 cttttatgtg gtccccacga gggttacaca gacgtcactg tcaaccaatc aaattgcatc 240 ctcaaacgtt agataagtgt tcatttgtct ttatatactt ggtccccaag ttttttgtct 300 tgcaatatgt gggacccact tcttaatgag tttcctgaat ctgttcacgg atttcgttgt 360 atgttagcta ttaaatattt gcagtccgtt gaggaaactt acgagcccaa tacattgggc 420 cacgatttaa ttagggatct tatatctgtt gtaagggccc gtgactatgt cgaagcgacc 480 aggcgatata atcatttcca cgcccgtctc gaaggttcgc cgaaggctga acttcgacag 540 cccatacagc agccgtgctg ctgtccccat tgtccaaggc acaaacaagc gacgatcatg 600 gacgtacagg cccatgtacc gaaagcccag aatatacaga atgtatcgaa gccctgatgt 660 tccccgtgga tgtgaaggcc catgtaaagt ccagtcttat gagcaacggg atgatattaa 720 gcatactggt attgttcgtt gtgttagtga tgttactcgt ggatctggaa ttactcacag 780 agtgggtaag aggttctgtg ttaaatcgat atatttttta gggaaagtct ggatggatga 840 aaatatcaag aagcagaatc acactaatca ggtcatgttc ttcttagtcc gtgatagaag 900 gccctatgga agcagcccaa tggattttgg acaggttttt aatatgttcg ataatgagcc 960 cagtaccgca accgtgaaga atgatttgcg ggataggttt caagtgatga ggaaatttca 1020 tgctacagtt attggtggac cctctggaat gaaggaacag gcattagtta agagattttt 1080 taaaattaac agtcatgtaa cttataatca tcaggaggca gccaagtacg agaaccatac 1140 tgaaaacgcc ttgttattgt atatggcatg tacgcatgcc tctaatccag tgtatgcaac 1200 tatgaaaata cgcatctatt tctatgattc aatatcaaat taataaaatt tatattttat 1260 atcatgagtt tctgttacat ttattgtgtt ttcaagtaca tcatacaata catgatcaac 1320 tgatctgatt acattgttaa tggaaattac accaagacta tctaaatact taagaacttc 1380 atatctaaat actcttaaga aatgaccagt ctgaggctgt aatgtcgtcc aaattcggaa 1440 gttgagaaaa catttgtgaa tccccatgac cttcctgatg ttgtggttga atcttatctg 1500 aatggaaatg atgtcgtggt tcattagaaa tggcctctgg ctgtgttctg ttatcttgaa 1560 atagagggga ttgtttatct cccagataaa aacgccattc tctgcctgag gagcagtgat 1620 gagttcccct gtgcgtgaat ccatgattat tgcagttgag gtggaggtag tatgagcagc 1680 cacagtctag gtctacacgc ttacgcctta ttggtttctt cttggctatc ttgtgttgga 1740 ccttgattga tacttgcgaa cagtggctcg tagagggtga cgaaggttgc attcttgaga 1800 gtccaatttt tcaaggatat gtttttttct tcgtctagat attccctata tgaggaggta 1860 ggtcctggat tgcagaggaa gatagtggga attccccctt taatttgaat gggcttcccg 1920 tactttgtgt tgctttgcca gtccctttgg gcccccatga attccttgaa gtgctttaaa 1980 taatgcgggt ctacgtcatc aatgacgttg taccacgcat cattactgta cacctttggg 2040 cttaggtcta gatgtccaca taaataatta tgtgggccta gagacctggc ccacattgtt 2100 ttccctgttc tgctatcacc ctcaatgaca atacttatgg gtctccatgg ccgcgcagcg 2160 gaagacacga cgttctcggc gacccactct tcaagttcat ctggaacttg attaaaagaa 2220 gaagaaagaa atggagaaac ataaacttct aaaggaggac taaaaatcct atctaaattt 2280 gaacttaaat tatgaaattg taaaatatag tcctttgggg ccttctcttt taatatattg 2340 agggcctcgg atttactgcc tgaattgagt gcttcggcat atgcgtcgtt ggcagattgc 2400 tgacctcctc tagctgatct gccatcgatt tggaaaactc caaaatcaat gaagtctccg 2460 tctttctcca cgtaggtctt gacatctgtt gagctcttag ctgcctgaat gttcggatgg 2520 aaatgtgctg acctgtttgg ggataccagg tcgaagaacc gttggttctt acattggtat 2580 ttgccttcga attggataag cacatggaga tgtggttccc cattctcgtg gagttctttg 2640 caaactttga tgtatttttt atttgttggg gtttctaggt tttttaattg ggaaagtgct 2700 tcctctttag agagagaaca attgggatat gttaggaaat aatttttggc atatatatta 2760 aataaacgag gcat 2774 //