ID   AB541478; SV 1; linear; genomic RNA; STD; VRL; 477 BP.
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AC   AB541478;
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DT   18-JAN-2010 (Rel. 103, Created)
DT   10-MAY-2011 (Rel. 108, Last updated, Version 3)
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DE   Odontoglossum ringspot virus CP gene for coat protein, complete cds,
DE   strain: CK13.
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KW   .
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OS   Odontoglossum ringspot virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
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RN   [1]
RP   1-477
RA   Choi S., Yoon J., Chung B.;
RT   ;
RL   Submitted (12-JAN-2010) to the INSDC.
RL   Contact:Seung-Kook Choi Myong-Ji University, Bioinformatics and
RL   Biosciences; Namdong, Cheoin-gu, Yong-In, Gyeonggi-do 449-728, SOUTH KOREA
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RN   [2]
RC   DOI:10.1007/s11262-010-0554-8
RX   DOI; 10.1007/s11262-010-0554-8.
RX   PUBMED; 21127958.
RA   Yoon J.-Y., Chung B.-N., Choi S.-K.;
RT   "High sequence conservation among Odotoglossum ringspot virus isolates from
RT   orchids";
RL   Virus Genes 42(2):261-267(2011).
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DR   MD5; 10c1f3f9a8da62dc45a80be8caf24450.
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FH   Key             Location/Qualifiers
FH
FT   source          1..477
FT                   /organism="Odontoglossum ringspot virus"
FT                   /host="Cymbidium virescens"
FT                   /lab_host="Nicotiana tabacum cv. Samsun"
FT                   /strain="CK13"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea:Choong-Nam"
FT                   /collected_by="Bong-Nam Chung"
FT                   /collection_date="02-Oct-2006"
FT                   /identified_by="Bong-Nam Chung"
FT                   /db_xref="taxon:12238"
FT   CDS             1..477
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O12854"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:O12854"
FT                   /protein_id="BAI66499.1"
FT                   /translation="MSYTITDPSKLAYLSSAWADPNSLINLCTNSLGNQFQTQQARTTV
FT                   QQQFADVWQPVPTLTSRFPAGAGYFRVYRYDPILDPLITFLMGTFDTRNRIIEVENPQN
FT                   PTTTETLDATRRVDDATVAIRSAINNLLNELVRGTGMYNQVSFETMSGLTWTSS"
XX
SQ   Sequence 477 BP; 139 A; 101 C; 92 G; 145 T; 0 other;
     atgtcttaca ctattacaga cccgtctaag ctggcttatt taagctcggc ttgggctgac        60
     cccaattcac taatcaacct ttgtaccaat tctctgggta atcagttcca aacacaacaa       120
     gctcgaacaa ctgttcaaca gcagtttgct gatgtttggc agccggttcc tactttgacc       180
     agtaggttcc ctgcaggcgc tggttacttc agagtttatc gctatgatcc tatattagat       240
     cctttaataa ctttcttaat gggtactttt gatactcgta atagaataat cgaggtagaa       300
     aatccgcaga atccgacaac tacggaaaca ttagatgcaa ctcgtagagt tgatgatgca       360
     actgtagcaa taagatctgc aataaataat ctattaaatg agttagttag gggaactggt       420
     atgtacaatc aagtctcatt tgagacgatg tctggactta cttggacctc ttcctaa          477
//