ID AB693150; SV 1; linear; genomic RNA; STD; VRL; 3419 BP. XX AC AB693150; XX DT 30-SEP-2012 (Rel. 114, Created) DT 07-OCT-2012 (Rel. 114, Last updated, Version 2) XX DE Lunk virus NKS-1 RNA, segment S, complete sequence. XX KW . XX OS Lunk virus NKS-1 OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3419 RA Ishii A., Sawa H.; RT ; RL Submitted (18-JAN-2012) to the INSDC. RL Contact:Akihiro Ishii Research Center for Zoonosis Control, Hokkaido RL University; kita-ku, N20, W10, Sapporo, Hokkaido 0010020, Japan XX RN [2] RX DOI; 10.1099/vir.0.044099-0. RX PUBMED; 22815269. RA Ishii A., Thomas Y., Moonga L., Nakamura I., Ohnuma A., Hang'ombe B.M., RA Takada A., Mweene A.S., Sawa H.; RT "Molecular surveillance and phylogenetic analysis of Old World arenaviruses RT in Zambia"; RL J. Gen. Virol. 93(Pt 10):2247-2251(2012). XX DR MD5; 97e8f91f80d4029be20961fee0c6a1ac. XX FH Key Location/Qualifiers FH FT source 1..3419 FT /organism="Lunk virus NKS-1" FT /segment="S" FT /host="Mus minutoides" FT /strain="NKS-1" FT /mol_type="genomic RNA" FT /country="Zambia:Lusaka" FT /isolation_source="kidney of rodent specimen: CZC 10LR34" FT /collection_date="10-Aug-2010" FT /db_xref="taxon:1134579" FT CDS 98..1585 FT /codon_start=1 FT /transl_table=1 FT /gene="GP" FT /product="Glycoprotein precursor" FT /db_xref="GOA:K0IT71" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/TrEMBL:K0IT71" FT /protein_id="BAM45328.1" FT /translation="MGQIVTLFESLPHIIDEVINIVIMVLILITAIKAVYNLCTCGLFA FT LIMFLFMAGRSCSLEGPGMYKGTYQFKSVELNMSQFNQTLPNACSVNNSHHYIGMGDSG FT LELTFTNDSIIDHNQCNLTDYFKKSHFDHVLSSIITHLHLSVRGHSYYKAVSCDFNNGI FT TIQYNLSINTPQKAVDNCRSFRGRVLDMFRTAFGGKHMRAGFGMTDANGKATWCSQTDY FT NYLIIQNRTWDNHCEYANPMGFARLLFAQEKTKFLTRRLMGTFTWTLSDSSGVESSSGY FT CLTRWMIIAADLKCFGNTAVAKCNLNHDEEFCDMLKLIDYNKAALTKFKKDVESALHLF FT KVTMNSLISDTLLMRNHLRDLMGIPYCNYSKFWYLEHYKTGETSLPKCWLVSNGSYLNE FT THFSDEIEQEANNMITEMLRKDYYKRQGSTPLALMDILMFSTSAYLISVFLHLLRIPTH FT RHVKGGTCPKPHRLNSKGICSCGAFKVPGVKVIWKRN" FT CDS complement(1654..3330) FT /codon_start=1 FT /transl_table=1 FT /gene="NP" FT /product="nucleoprotein" FT /db_xref="GOA:K0ISU0" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/TrEMBL:K0ISU0" FT /protein_id="BAM45329.1" FT /translation="MAQSKEVKSFQWTQCLRRELQSFTSNVKAAVIRDATNLLNGLDFA FT EVSNVQRIMRKDKRDDKDLQRLRSLNQTVNSLVELKSSTKKNVLKIGRLTAEELMSLAA FT DLEKLKLKVLRSERPQVSGVYLGNLTTQQLDQRSQILQMVGMSRENPRSNGVVRVWDVK FT DSSLLNNQFGTMPSLTMACMAKQSQTPLNDVVQALTDLGLLYTVKYPNLTDLEKLREKH FT PVLGIVTEQQSGINISGYNFSLNAAVKAGASLLDGGNMLETIQIKPNNTDDLLKAILSA FT KKKLGMFVSEQSGDRNPYENILYKTCLSGEGWPYIACRTGITGRAWENTTIDMSGDKNR FT NTPVRMNPGSAGPPAVGLGYSQIMLLKDLMGGIDPNAPTWVDIEGRHDDPVEIAFFQPG FT NGQYIHFYREPVDQKQFKQDSKFSHGMDIADLLDVQPGLTSAVLGALPPGMVLSCQGSD FT DIRKLLDSQGRKDIKLIDIEMSKDASREFEDKVWDKYGFLCKKHTGVVKDKKKKEITPH FT CALMDCLIFESATKAKLIDLKGIHNILPHDLIYRGPNIVNL" XX SQ Sequence 3419 BP; 890 A; 797 C; 738 G; 994 T; 0 other; cgcaccgggg atcctaggca ttttggattg cgctttgttg tggtcctttg ttatactcca 60 cgattcgagg tgccaccgta ctacacagag gggaccaatg gggcagattg taaccctctt 120 tgagtcactg cctcacatta ttgatgaggt gatcaacatt gtcatcatgg tcctcatttt 180 aatcacagcc ataaaggcag tctacaacct ctgcacatgt ggcttgtttg cgctgatcat 240 gttcctgttt atggcaggca gatcatgttc tctagaaggc ccaggcatgt acaagggaac 300 ctatcagttc aagagtgttg agttgaacat gtcacaattc aaccagacac tccctaacgc 360 atgttctgtg aacaacagtc accattacat cgggatgggt gactcgggtt tggagctgac 420 attcaccaat gactcaatta ttgaccacaa ccagtgtaac ctgactgatt acttcaagaa 480 gtcccacttt gatcatgtgc tctctagtat cataactcat ctgcatctat cagtcagggg 540 gcatagctac tataaagctg ttagttgtga cttcaacaat ggaataacaa ttcagtacaa 600 cttgagcatc aacactcctc aaaaggctgt ggataactgc agatctttca gagggagggt 660 gttagacatg tttagaaccg cttttggagg gaagcacatg agagcaggtt ttgggatgac 720 agatgcaaat gggaaagcca cttggtgcag tcaaactgat tacaactatt taatcattca 780 aaacaggact tgggataacc actgtgagta tgcaaatccc atgggattcg ccaggctcct 840 atttgctcaa gagaagacca agttcctgac aagaaggttg atggggacat tcacatggac 900 tctctcagac agctccggag tggaaagttc gtcaggttac tgtctcacaa ggtggatgat 960 aatagcagca gatttgaaat gttttgggaa cacagcagtt gccaagtgca acctaaatca 1020 tgatgaagag ttctgcgata tgcttaaatt aattgactat aacaaggcag ccttgacgaa 1080 gttcaagaaa gatgttgaat ctgctttgca cctgtttaaa gtgacaatga attccctcat 1140 atctgacacc ctcctaatga ggaatcacct tagggatctt atgggaatac cttattgcaa 1200 ctactcaaaa ttctggtatc tagaacatta caaaactggt gaaacaagtt tacctaagtg 1260 ttggctcgtg agtaatgggt cttatttaaa tgagactcat ttctcagatg agattgaaca 1320 agaagctaat aatatgatta cagaaatgtt aagaaaggac tactacaaga ggcaaggatc 1380 aactccactg gctctaatgg atatattgat gttctctaca tctgcctatc taatcagtgt 1440 cttccttcat ctattgagaa tcccgactca cagacacgta aaaggcggga catgtccaaa 1500 gccgcaccgc ctcaacagca aagggatttg ctcttgtgga gcttttaaag ttccaggtgt 1560 caaggtgatc tggaagagga actaaccctg aacggacacc cccctgacct cccacctctt 1620 tcgaggtggg aggtcagggg ggccggttgg cttctagaga ttcacgatgt ttggacctct 1680 atatatcagg tcatgtggta atatgttgtg gattcctttg agatcgatga gctttgcttt 1740 tgttgcagac tcaaaaatca gacaatccat caaagcacaa tgcggtgtga tttccttttt 1800 ctttttatcc ttgaccaccc cagtgtgctt tttgcaaaga aatccatatt tgtcccaaac 1860 tttatcttcg aactctcttg aggcatcttt tgacatttca atgtcaatta gcttgatgtc 1920 cttcctgccc tgtgagtcaa gcaatttgcg gatgtcatct gaaccctggc atgacagaac 1980 catgccaggt ggcagtgcac caaggacagc agacgtcaga cctggttgga catcaagtag 2040 gtcagcaatg tccatcccat gagaaaactt ggagtcctgt ttgaattgtt tctgatccac 2100 aggctccctg taaaagtgaa tatattgccc atttccaggt tggaagaagg caatttccac 2160 tggatcgtca tgcctaccct caatgtccac ccaggttggg gcatttggat caatcccccc 2220 catcaagtct ttcaacaaca tgatttggga gtagcctaag cccactgctg gaggccctgc 2280 agatcctggg ttcatcctca ctggtgtatt tctattcttg tctccactca tgtcaattgt 2340 tgtgttctcc catgccctcc cagtgatgcc cgttctgcag gcgatgtagg gccacccctc 2400 tcctgaaaga caggttttgt agagtatgtt ctcataagga ttcctgtctc ctgactgttc 2460 agacacaaac atcccaagct ttttcttggc tgataaaatt gccttcagca ggtcatctgt 2520 gttattaggc ttgatttgta tagtttcaag catgttgccc ccatcgagga gtgaagcacc 2580 tgccttcaca gctgcattta gactaaaatt gtatccagat atatttatcc cagactgctg 2640 ctctgtcact atccccaaca ctggatgctt ctcccttagt ttttccaggt cagtgaggtt 2700 gggatatttg actgtataaa gcaatcccag gtctgtcagt gcttgcacaa catcattgag 2760 aggtgtctgt gactgtttgg ccatgcaagc cattgtcaga gagggcatgg ttccaaactg 2820 attgttaagt aaggaggagt ctttgacatc ccacactctc actacaccat ttgatcttgg 2880 gttctctcga ctcatcccca ccatttgcaa gatttgtgat ctttgatcta gttgttgagt 2940 ggtgaggttc cccaagtaga ccccacttac ctgtggcctc tcagatctca agaccttcag 3000 cttgagtttc tccaagtcag cagcaagtga catcaactct tcggcagtga gtcttcctat 3060 cttcaaaaca ttctttttcg ttgaagattt gagctcaacc agagagttga cggtctgatt 3120 taaactgcga agcctctgta gatctttgtc gtctcttttg tccttcctca ttattctctg 3180 aacgttgctg acttctgcaa agtctaaccc attcaacaag tttgtggcat ctcggatcac 3240 agctgctttc acatttgaag tgaaactctg gagctctctc ctgaggcatt gagtccactg 3300 gaagctcttc acttccttgg attgtgccat cttcagcaag ccaactatga gctaatcttt 3360 ctcccacaaa gtaggtcaaa gaaactgcgc tctaattcgc ctaggatcca ctgtgcgcg 3419 //