ID   AB796351; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796351;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: Ki.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 57f94fece8908ea63a4d6aaddddcd91a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /cultivar="Giovanni"
FT                   /isolate="Ki"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Miyako, Kawai"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZT75"
FT                   /protein_id="BAM99892.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVTEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTMTTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 497 A; 337 C; 442 G; 391 T; 0 other;
     gaagacaggc gagtccaaga tggttgatca cttcgccttt attgatgtct cccgagatgg        60
     acaggttatt cctgtccctt tcgttgacag aactaaaggt tacagtgggc ttcctatcct       120
     ggatgagttt ggacacccag tgggaatctt cggatttctt aggacaatga gggccaagac       180
     ggaaaatggc gtgattgata gaccagagag cgctcgtccg agtgtgcaag ttgggcagtt       240
     tgatataaca acgaaagctg tcgacgtact acaagctgtc agaggagctg gcgcaaatgg       300
     aaagtggctc agacttgggg ccccaacagc ttctgggaag agcacaagac ttgtgaagga       360
     aattggaaga ataatgtacc agaaagctcg caggcccatt cacatcgccg tgcttgagcc       420
     tagggtattc gttgtgaaca acttgtggca agggcaaagc atgatgacca atgctgatgc       480
     gaaagattgc acattcttta atatcgtccg caaacacggg cgattgtatg aaaatgacaa       540
     aacgcaatcg cataaggatc caagtcaagc gaaagtcaca ataacttaca tgacctatgg       600
     atcaatggtg gccagcctcg ggaaagagct cagatgggat ttagttatct tggatgagtt       660
     ccacagtcgg agtgatagtg atgtgttggc agtcgatgcc gcactgcaag tgttgggaca       720
     ttacaacggt gtcatggcaa tgactgcaac cttctgggca ccagacccaa caatgaatag       780
     atttgttgat tactcaattg gaacagcgaa gaagttccca atcgagagaa aggtgatcaa       840
     gaaattcgat tccgtcactg aaggtgaaga agggctgtat ttcaagatca gaggccctga       900
     cggtacattc tacgccctgc caagggaaag ttgcaatgca ggagggaaga ctatcgtttt       960
     cctagatagt aaaaacaact gtgcgaaagg aatgaaggaa ctcttggcga caggaccggg      1020
     agtgaacgta atgacactca caagtgaaaa tagggacgtc gaaattccag atggtcaagt      1080
     ggtgattttt gccacgaacg ttgctgagag cggcgtcaca attgtaaatt gtgacaatgt      1140
     gattagcttc ggagtgcaga tcgagccaca agcaggtttt gatgtaaatc tgggcgaaga      1200
     tggaactttt gattcctatc attcacttgt gcagacgaaa ataacaactt gtgcagaaac      1260
     ccagcagatg ggaagaaccg gaaggacatg tccaggaaca ttttggacaa cgatgacaac      1320
     acctctccca gagatgacag atttccctag acacgccatg tctggggcat acttaacatt      1380
     gatgagaaac gatgaagtca tggagatggc tgaagtcagg caacgtggtg gacaatggga      1440
     agatcttcta cacacgttga ggaatttaca tccaaagttt ttgccagcta gtctcaattt      1500
     cagggctgtc aaaggggagt atcccagtat tactgagttg aaggacttta gagagctcca      1560
     cattcgtgaa ggggcgcaag aggacatctt ttggcggaaa ctagaggttg ttcagtgtat      1620
     tcaatacatt gacccaatca ccttctacct gctgcctaac ttcccaa                    1667
//