ID   AB796381; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796381;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: NW28.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 626ee16c01222af84056ea229de98e59.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="NW28"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Waga, Kaisawa"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M4ZTA3"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZTA3"
FT                   /protein_id="BAM99922.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   TRRTRQDKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKYHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNSSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECRTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRKGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYRSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEATTPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHNYNRCRIGKISTPVEMTEMSGVAEMVPIDCVPKTFKKVDNDNLPLQHLRDKKL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 563 A; 365 C; 435 G; 370 T; 0 other;
     gtatgtagag ataaggtgga gaccaaagcc aagaagaaca tcgataacgg tcgtctgctg        60
     ataccagatt gtacggacga gatcgaccct agagggaaat cgtacaagta cttgccttac       120
     acgaagaaag aagaaaccag gagaactagg caagacaagt taagacaggc gagcaacatc       180
     gcgcccagga acatccgctt tgcagaattc gtgcagcgct ttgcggatct gatgattcta       240
     ggacctgtgc agaaatatca tgcacataaa gagaaattgt attatggatc atcaacaggg       300
     acgcctctct ggaggctagg aaatttgacg aaggcgttac acgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttctgag cttgggtgcg atgtatgcgg ctattacaac       420
     aactcatcat gttcttgttt gattgttgat gggaagttgt gccaagtaca tggccttaag       480
     cacggggaga ctcagtcttc aaaatgtaaa gagtgtagaa cacacagagg cgactcggca       540
     aacgagcaag agtggttcaa gaacatcatg aacaacaaaa cggaactgct cagtgaacaa       600
     gcctatatcc gcatgtacga ccctagcttt aggaagggac tagagagaaa agcgcttaaa       660
     gcgatgatag cgagtggaga cttctccggg ttcgacggaa cagtgtcaaa aacagatttg       720
     gtattaaatt acatattcta caagaacatc tatagaagtg aataccatct catgctcaaa       780
     acccggtggg aacattggat gtgggcgtta gtcataaacg accatgggca cgtcatcgtc       840
     agcgacggac agagatcctc aggagatcaa gacacaagct ttggcaatac aatgatcaat       900
     ggtatttacc attttgccag tacagcactc tccttgggga tatcaattga agaggcaaca       960
     accccaattg gggaagtatg gttccggagt gactttgact atacaacacc gaagtacaag      1020
     aaattgtact tacatcgaat cagtcacatt tcagacggag acgacaacct gcacttcggg      1080
     agcaaagagg acattgaaaa gttcgacaag aatggaccca tgctcctgga acgtgcagga      1140
     aagaagatta gatgcggaac tcgatccggt tacgacctga cggaaagcta ctcagggatc      1200
     agttactgca gtcataacta caaccgatgt agaatcggaa aaatctcaac accagtagaa      1260
     atgacagaaa tgtcgggggt ggcagaaatg gtgcccatcg attgtgtccc caaaacattc      1320
     aaaaaggtgg acaatgacaa tctcccgtta caacatctga gggacaaaaa attaggcctc      1380
     cgggtcgaat atatgccagc cagagctatg agcgaaataa tcggcaagct ggtaatgacg      1440
     atgaagggca gcaccgccaa catggacttc acgagagatt acggctcatc gacaaaggag      1500
     cagaagagag gccaaaagaa cgaagaggcc attgccataa cacgaggcaa actgctcagc      1560
     tacctactga attattgtca gtattcagtg gtcagaattt tagtgatgag tgcgttttcc      1620
     attattggag acggtgtctg caacttgcag gaattaaagc gtcggtacaa cgtgcctagc      1680
     ataaccaaga cgattggttc tgccttgcgc ggggtattca acatctcgac gct             1733
//