ID AF133428; SV 1; linear; genomic RNA; STD; VRL; 4350 BP. XX AC AF133428; XX DT 28-NOV-2000 (Rel. 66, Created) DT 28-NOV-2000 (Rel. 66, Last updated, Version 1) XX DE Colorado tick fever virus segment 1 putative RNA-dependent RNA polymerase DE VP1 gene, complete cds. XX KW . XX OS Colorado tick fever virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Coltivirus. XX RN [1] RP 1-4350 RA Attoui H., Billoir F., De Micco P., De Lamballerie X.; RT ; RL Submitted (08-MAR-1999) to the INSDC. RL Virologie, Faculte de Medecine de Marseille, 27-Boulevard Jean Moulin, RL Marseille 13005, France XX DR MD5; 0ed5c7b4da891daf5293b07f5879c74a. XX FH Key Location/Qualifiers FH FT source 1..4350 FT /organism="Colorado tick fever virus" FT /chromosome="segment 1" FT /strain="Florio; N-7180" FT /mol_type="genomic RNA" FT /db_xref="taxon:46839" FT CDS 14..4321 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase VP1" FT /db_xref="GOA:Q9DSQ0" FT /db_xref="InterPro:IPR007097" FT /db_xref="UniProtKB/Swiss-Prot:Q9DSQ0" FT /protein_id="AAG34362.1" FT /translation="MARRPSKEWRERFNALSLKCKQLIHSSITNDFTTTDKAQQSTFYS FT SSGLMDVRKRLSISESLEVFGSLIDNWDLVQLVGTRAEPFVLNNPASYLLVNQLLALAG FT QAHSAASMVFLNSLMYDDALDHVNLWPYEVERPIPQITREVLSPPPFSVNSYYLQRDID FT VIKAKTKAAVYIENYRAGDVFAKKRSISKGATFEERVYHGAVTMLQRMVKLRGSTIQEC FT FVIAISSYRCSDCVRRMMASESGTGAIHEMDHICIMRSNALRWLQAAFSDFPEFPFLMT FT RDGVKFASNCGAVSTQVPLLFFQTLEMMVLTMDGTLSSTWEGWVCCEWYDRARVGLFSE FT MFDRRGVVAHLREAILRQSRLLRYQSRGLHLASVSNFPKRSVSADGLDDRIIEGLQKFN FT SKVCSFIQSWIFQIDLVDEPARWLAVMIKTFASALLYVMGATSLSLEQSAQGTLGIGDP FT ISFPRQEILLEGEWIAVDWYYPDPDLADMREMGMALVDNASPEYTDWEYGFFNVQTTNS FT AGNVKEVIEERRKQLVAEFGDQGKLLAKVENTRILDAVQKITSTFQNPQDFCDSADNVR FT KAGERHQVGRRPRVIQMVGTEGQLSAFVLHNVLRPAYKATRFTTSGKNSGDIRDMNIVL FT EISGELGYKSSLDVKGMDSSTKPFQTNLSLSCVFHRLRGEVLGYPAFFLGSTSSSKDNY FT VVTRTRYRDEHGGILVEEEYKLTYPQYVLLLGAIHWTSPTRFTDGYFQEFVMTSRTVFR FT SGLLNTADQHTFLGVIMYALLEKRLRQRWYGKHGKEMREKIGQRREALEEYEEHVKLLG FT SVLGDDQVAGAFCQGIVDEEVILRITRDLCDETKFLMERLGYECEPEISEYSAEFLKQK FT GVLGAPELFPERLLLFSSERGDMAGSLPLDRVKIMLSMTDEKIGRARCPLPYASLMLFT FT SWVSGTASFSIGEEGRLLYRTGRNWKKVFASKRAASVAWKDQFTSDGVFDVRWNGFGMF FT YKEWASANTKTILLGCGLLWACSDALGVPFPPLVQKDEILCPGTSVYTIPSNAMTHYLL FT WATRRDRADAERMWRAVRDDLLRGDNDPLESYIEYVDKMFAEVGVIDIPFSALHIYGVG FT MGFVAGVMPVPMEVWYDFGLFGKVGGFGTWIAELVFKDIRIDREKYDLPRLSMWKNAAN FT HSLPSEVRRASLYARDTLHEKYGMVVPSAVLVAERPGCKIDQALFEVRRVGMEDVRELE FT KVLDELTRLNHLERKFTKRLAMGLFIVEKLTERRTGYGPAIASNGWGHIAAPYSFQARL FT LECLAFPMYNGFNYEAVRERVFVDGKLPGDPKLYLKIGRQALSYSEEAYNLVSASMGLS FT SRQAADMRDMILEGINGLEEARFALNPRKTFLFDVSRRKGAGFFQTPHRRKTNQAYCEM FT MGMALLLMEPWKFSSGDWRMSFSHRLRAILGRR" XX SQ Sequence 4350 BP; 1114 A; 748 C; 1202 G; 1286 T; 0 other; gacattttgc gagatggcac gccgtccttc gaaagagtgg agagagagat tcaatgcctt 60 atccctgaaa tgcaagcaac taatacattc atcaattaca aatgatttta caacaactga 120 caaagcacaa caaagtacct tttattcctc ttctggttta atggatgttc gtaagaggtt 180 atcgatctct gaaagtttgg aagtgtttgg tagcctgatt gataattggg atcttgttca 240 gctagttgga actcgagcgg agccttttgt gttgaataac cctgcttctt atttattggt 300 taatcaatta ttggccttag cgggacaagc tcattctgca gcttctatgg tgtttctaaa 360 ttcgttgatg tatgatgatg cacttgatca tgtgaatcta tggccttatg aagttgagcg 420 tccaatccct cagatcacta gagaagtttt gtcaccccca cctttcagtg tcaattcata 480 ttacttgcag agagacatcg atgtcattaa ggcgaagaca aaagccgcgg tatatatcga 540 gaattatcga gcaggcgacg tttttgcgaa gaagcgaagt attagtaaag gagccacatt 600 tgaagagaga gtctatcatg gtgctgtgac tatgttgcaa cgaatggtta agctacgagg 660 atctaccatc caagaatgct ttgtcatcgc tatttcgtcc tatcgatgtt cagattgtgt 720 tcggcgaatg atggcatccg agtctggtac tggcgcaatc catgaaatgg atcatatttg 780 cattatgcga tctaacgcac ttagatggct gcaagctgcg tttagtgact ttccagaatt 840 tccgttttta atgacgcgtg atggtgtaaa gtttgcctca aattgtggtg cagtaagtac 900 gcaggttcct ttgctgtttt tccaaacact agagatgatg gtgttaacta tggatgggac 960 attaagctca acatgggaag gatgggtgtg ttgtgagtgg tatgacaggg cgagagttgg 1020 tttgttttcc gagatgtttg atcggcgggg agttgtagcc catctgagag aagccatttt 1080 gcgtcagagt cgattgcttc gatatcagag tcgcggcttg catttggctt cggtgtctaa 1140 ttttcctaag agaagcgtga gcgctgatgg tttggatgat cgaataattg agggtttgca 1200 aaaattcaac agtaaggtgt gctcttttat ccagtcatgg attttccaga ttgatttggt 1260 tgatgaacct gctaggtggc tagcggttat gataaaaacg tttgcaagtg cattgttata 1320 cgttatgggt gcaacatctc tatctttgga acaatcagca caaggtactt taggtattgg 1380 agatccaata tcgtttccaa gacaagagat tttgttagaa ggggaatgga ttgcagtgga 1440 ctggtactat cctgacccag atttagcgga catgcgtgag atgggaatgg cattagtgga 1500 taacgcatct ccagagtaca cggactggga atatgggttc ttcaatgtgc agactactaa 1560 tagtgcaggt aatgtgaaag aggtaattga agagcgaaga aagcagttgg ttgccgagtt 1620 tggggatcaa ggaaaattgc tggcgaaagt cgagaacaca cgtatccttg atgctgttca 1680 aaaaatcact tccacatttc agaatcctca agatttctgt gattctgccg ataatgtacg 1740 taaagctggt gagaggcatc aagttggtcg gcggcctaga gtgatacaga tggttggtac 1800 tgagggtcaa ttgtccgcat ttgtattgca caatgtactt cgtcctgcct ataaggctac 1860 taggtttact acgtcaggca agaattctgg ggatataaga gatatgaaca ttgtgcttga 1920 aatttcaggc gagcttggat ataagtcttc tctggatgta aaaggtatgg attcgtctac 1980 gaagcctttt cagactaatt tgtcacttag ttgtgtgttt catcgtctta ggggagaggt 2040 tctcggttat ccagcgtttt tcttgggatc gacgtcgtct tccaaagata attatgtagt 2100 gacgagaaca cggtatcgtg atgagcatgg ggggatcctc gttgaagaag agtataagtt 2160 gacttatccg cagtacgttt tattgctggg agcgatacac tggacgagtc caaccaggtt 2220 tactgatggt tactttcagg agttcgtcat gacatctcga actgttttta ggtcaggttt 2280 gttaaatact gcggatcagc atacgtttct tggcgtgatt atgtatgccc ttttggagaa 2340 aagattgagg caacgatggt atggcaagca tggtaaggag atgcgggaaa agattggcca 2400 gcggagagaa gcgcttgaag agtatgagga gcatgttaag ttgctcggtt ctgtacttgg 2460 tgatgatcag gttgctggag ctttttgtca aggaattgta gatgaagaag ttattttaag 2520 gattacgagg gatttgtgcg atgagacaaa gtttttgatg gaaaggttag gttatgagtg 2580 tgagccggag atatctgaat attctgctga gtttcttaaa cagaagggag tgcttggagc 2640 gcctgaattg tttccagagc ggctgctttt attttcgtcg gaaagaggtg atatggctgg 2700 gtcacttcct cttgatcgag ttaaaatcat gttgagtatg acggatgaga agattggccg 2760 cgcgcgatgt cctttgcctt atgcgtcatt aatgttgttc acatcctggg tgtcggggac 2820 tgcttctttt tcaattggtg aagaaggtcg gctgttatat cggactggta gaaattggaa 2880 gaaggtattt gcatctaaaa gagccgcatc cgttgcatgg aaggatcaat tcacgtccga 2940 tggagtgttt gacgtccgat ggaatggttt tgggatgttc tataaagagt gggcttctgc 3000 aaataccaag acgatcttac ttggatgcgg gttattgtgg gcttgcagtg acgcgcttgg 3060 agttccgttc cctcccctgg tgcaaaaaga tgagattcta tgtccgggaa cgtcggtata 3120 tacgattcct tcgaacgcaa tgacacacta tctcctctgg gcaacacgta gagatcgagc 3180 agacgcagaa cgtatgtggc gggcagtccg agacgattta cttcgtggtg acaatgatcc 3240 attggaaagc tacattgaat atgtagataa gatgtttgcc gaagtgggag ttattgacat 3300 tcctttttca gcgcttcata tttacggagt tgggatggga ttcgtcgctg gagtaatgcc 3360 tgtacctatg gaagtgtggt atgattttgg cttgtttgga aaagtaggag ggtttgggac 3420 gtggattgca gaacttgttt ttaaggacat ccggattgac cgtgagaaat acgatttacc 3480 tcggctgtct atgtggaaga atgcggccaa ccattcactg ccgagtgagg ttcgtagggc 3540 gagtttgtat gcacgggata cgttgcatga aaagtatgga atggtagtcc cgtcagctgt 3600 tctagttgct gaacgtccag gatgtaagat cgatcaggcg ctgtttgagg tccgacgagt 3660 cgggatggag gatgttagag aacttgagaa agtgcttgat gagctaacac gcttgaacca 3720 cctggagcgg aagtttacta agaggctggc gatgggctta tttatcgttg agaaattgac 3780 tgagcgtaga actgggtatg gccctgcaat agcaagtaat ggatgggggc atattgccgc 3840 gccatatagc tttcaggcac gattgctaga gtgtttggcg tttccaatgt acaatgggtt 3900 caactacgaa gcagtacgtg aaagagtgtt tgttgatggg aagctcccgg gtgaccctaa 3960 attgtatcta aagataggga ggcaggcatt atcctatagt gaagaggcgt ataaccttgt 4020 atctgcttca atggggttgt caagcagaca agctgcggac atgcgcgaca tgatcttgga 4080 gggaattaac gggctagagg aagcacgatt tgccctaaat cctcgtaaga catttctgtt 4140 tgatgtttcg cgcagaaagg gtgcaggttt tttccaaact cctcaccggc ggaagactaa 4200 tcaggcatat tgtgagatga tgggtatggc gctactgtta atggaaccat ggaaattcag 4260 tagtggagat tggcgaatgt ctttctctca tcgcttgcgc gcaattcttg ggaggaggta 4320 ggaatctgag ctctccatcg ctttgcagtc 4350 //