ID AF155064; SV 2; linear; genomic DNA; STD; VRL; 2764 BP. XX AC AF155064; XX DT 12-JUN-1999 (Rel. 60, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Cotton leaf curl Gezira virus DNA-A replicative form, complete sequence. XX KW . XX OS Cotton leaf curl Gezira virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2764 RX DOI; 10.1023/A:1011967232319. RX AGRICOLA; IND23263265. RA Bigarre L., Chazly M., Salah M., Ibrahim M., Padidam M., Nicole M., RA Peterschmitt M., Fauquet C., Thouvenel J.C.; RT "Characterization of a new begomovirus from Egypt infecting hollyhock RT (Althea rosea)"; RL Eur. J. Plant Pathol. 107(7):701-711(2001). XX RN [2] RP 1-2764 RA Bigarre L., Chazly M., Salah M., Padidam M., Fauquet C., Peterschmitt M., RA Nicole M., Thouvenel J.C.; RT ; RL Submitted (28-MAY-1999) to the INSDC. RL LPRC, CIRAD/IRD, BP 5035, Montpellier 34032, France XX RN [3] RC Sequence update by submitter RP 1-2764 RA Bigarre L., Peterschmitt M., Fauquet C., Thouvenel J.; RT ; RL Submitted (04-AUG-2000) to the INSDC. RL LPRC, CIRAD/IRD, Montpellier 34045, France XX DR MD5; 6a9dbf3a02ade663cf1f6afe75c2f105. DR EuropePMC; PMC3102712; 21637815. XX CC On Aug 4, 2000 this sequence version replaced gi:5031499. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Cotton leaf curl Gezira virus" FT /mol_type="genomic DNA" FT /country="Egypt: Aswan" FT /note="highly related yet distinct from Althea rosea FT enation virus from Cairo, Egypt presented in GenBank FT Accession Number AF014881" FT /db_xref="taxon:222459" FT CDS 163..531 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:Q9IN51" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9IN51" FT /protein_id="AAF97436.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVRESYDPSTLGYDLLSDL FT IGVVRRTNYVEATSRYHHFHSRLESASPSELRQSRVILCTCPHCPRHKQTPGVVQQTQL FT QEAQNVQNVSEPRCPKGV" FT CDS 323..1099 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q9WNG8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9WNG8" FT /protein_id="AAD38192.2" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAW FT SNRPNYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKGTGLTH FT RTGKRFTIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATIKNDYRDRFQVMRKFSATVTGGPSGMKEQALVRRFFKINSQIVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1096..1497) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:Q9IN50" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9IN50" FT /protein_id="AAF97437.1" FT /translation="MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIRLTHGNQTMV FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRIGVISINNI FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY" FT CDS complement(1241..1645) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:Q77PZ9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q77PZ9" FT /protein_id="AAF97438.1" FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGDSSNARESNNGRDADKIQLQP FT QEGIGDSQMFHELQGLDDLTPSDWSFLKRI" FT CDS complement(1545..2633) FT /codon_start=1 FT /gene="AC1" FT /product="Rep" FT /db_xref="GOA:Q9IN48" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9IN48" FT /protein_id="AAF97439.1" FT /translation="MAPPHRFQIYAKNYFLTFPKCSLTKEEALEQIQKISTASNKKYIK FT ICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH FT NLNSNLERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPSRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEDKNAHLKSWALKNATFITLSNPL FT YSGTNQSPASGGQEESNQETQD" FT CDS complement(2183..2476) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9IN47" FT /protein_id="AAF97440.1" FT /translation="MANLIYMCFSSSKGSSSAKIRDSSTWSPQIGQHISIQTFRELNPA FT PTSSPTSTRMETHWNGENSRSTEDLQEEDNRPPMTLTPQRLTQEVRQRLLGL" XX SQ Sequence 2764 BP; 687 A; 610 C; 618 G; 849 T; 0 other; accggtgggc gcgaaaaaaa aaagtggtcc ccgccccacg tgaacatgtc gcgcgagtgc 60 tgaacatgtc gcgcgatgat gtccaatcag aacgcgcgct ctacgcatta taatttgaaa 120 tttgaaatat aaacttgctc cctaagtttg tccggcataa ctatgtggga tccgttattg 180 aacgacttcc ctgaatccgt tcacggtttc cgttgtatgc tcgccgtgaa atatttgcag 240 gctgttcgag agtcgtacga tccttccact cttgggtacg atcttcttag cgatctcatc 300 ggagttgttc gccgtaccaa ctatgtcgaa gcgaccagca gatatcatca tttccactcc 360 cgcctcgaaa gtgcgtcgcc gtctgaactt cgacagtccc gggttatcct ctgcacgtgc 420 ccccactgtc ctcgtcacaa acaaacgccg ggcgtggtcc aacagaccca attacaggaa 480 gcccagaatg tacagaatgt atcggagccc agatgtccca aaggggtgtg aaggtccatg 540 taaggtccag tcatatgaac agcgtgatga tgtgaagcat actggtattg ttcgctgtgt 600 ttctgatgtg actaagggaa ctgggcttac tcatcgtact ggaaagcgtt tcacaatcaa 660 atccatttat attcttggta aggtatggat ggatgagaac attaagaagc agaatcacac 720 caacaatgtg atgtttttcc ttgttcgtga tagaagacct tatgggaatt ccccgatgga 780 ttttggtcaa gtttttaaca tgtttgataa tgagcccagt actgctacta taaagaatga 840 ttatcgagat cgtttccagg tgatgcgtaa gtttagtgct actgtaactg gtggtccttc 900 tgggatgaag gaacaggctc ttgttcgtag gttttttaag attaacagtc agattgtgta 960 taaccatcag gaagctgcga agtatgagaa ccatactgag aatgctttgt tgttgtatat 1020 ggcatgtact catgcttcta atcctgtgta tgctacgtta aagatacgga tctacttcta 1080 cgattcggta tctaattaat acaattttat ttgaatattg tgagtgaatt cacttgccac 1140 tgttgtttgc aatacatcgt acaaaacatg attgactgcc ctaattatat tgttaattga 1200 aattacgcct attctataca aatatttcat aatctgcttc ctaaatacgt ttaagaaaag 1260 accagtcgga gggcgtgaga tcgtccagac cctgaagttc atgaaacatt tgtgaatccc 1320 caattccttc ctgaggttgt agttgaatct tatctgcatc tctaccattg tttgattccc 1380 gtgcgttaga cgaatctcct ttatggtttt gaaatacagg ggattgttga ttgtccagat 1440 aagtacgcca ttctctgtct gatgcgcagt gatgagttcc cctgtgcgtg aatccattgt 1500 ctctgcacgt gaaggctacg tataccgtgc aaccacaagg gatgtcaatc ctgcgtctcc 1560 tgattgctct cttcttggcc tcccgatgct ggactttgat tggtacctga gtacagcgga 1620 tttgagaggg tgatgaaggt cgcattcttt aatgcccagg atttgagatg cgcgttcttg 1680 tcctcgtcta aatactcttt ataagaggaa ttgggacctg gattgcagag gaagattgtt 1740 gggatgcccc ctttaatttg aactggtttc ccgtattttg tgttgctttg ccagtccttt 1800 tgtgccccca tgaactcctt aaagtgtttc agataatgcg ggtcaacatc atctatgacg 1860 ttataccatg cgtcattact gaacaccttt gggctcagat caagatgacc gcacagataa 1920 ttgtgaggcc caagacttct ggcccatacg gtctttcctg ttctgctttc cccttcaatc 1980 actatactaa tcggtctact tggccgcgca gcggcctcaa cgacgttctc cgccgcccat 2040 tcttcaagtt cttctggaac ttggtcgaac gaagaagaca aaaaaggaga aacataagga 2100 gctggaggct cctgaaaaat cctctctaaa ttactattta aattatgaaa ttgtaaaaca 2160 aaatctttgg gagctaactc ccttataacc ctaagagcct ctgccttact tcctgcgtta 2220 agcgctgcgg cgtaagcgtc attggcggtc tgttgtcctc ctcttgcaga tcttccgtcg 2280 atctggaatt ctccccattc cagtgtgtct ccatccttgt cgatgtagga cttgacgtcg 2340 gagctggatt tagctccctg aatgtttgga tggaaatgtg ctgacctatt tggggagacc 2400 aggtcgaaga gtctctgatt ttggcacttg aacttccctt cgaactggag aagcacatgt 2460 agatgaggtt ggccatcctc gtgaagctct ctgcagatct tgatatattt cttgtttgaa 2520 gctgtgctta ttttctgtat ttgctctagg gcttcctctt ttgttagaga acattttggg 2580 aaagttagga aataattctt ggcatatatt tggaatctgt ggggaggagc cattgacttg 2640 gtcaatcggt actcagatgc ttctctccaa tatatcggta ctcaatatat agtgagtacc 2700 aaatggcatt ttggtaaaaa tcccaataat tttgaacccc catagcgccc accgttctaa 2760 tatt 2764 //