ID AF189018; SV 4; circular; genomic DNA; STD; VRL; 2762 BP. XX AC AF189018; XX DT 04-OCT-1999 (Rel. 61, Created) DT 25-JUL-2006 (Rel. 88, Last updated, Version 4) XX DE Tomato yellow leaf curl Indonesia virus-[Lembang] segment A, complete DE sequence. XX KW . XX OS Tomato yellow leaf curl Indonesia virus-[Lembang] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2762 RX DOI; 10.1094/PD-90-0831B. RX AGRICOLA; IND43818611. RA Tsai W.S., Shih S.L., Green S.K., Akkermans D., Jan F.-J.; RT "Molecular characterization of a distinct tomato-infecting begomovirus RT associated wilth yellow leaf curl diseased tomato in Lembang, Java Island, RT of Indonesia"; RL Plant Dis. 90(6):831-831(2006). XX RN [2] RP 1-2762 RA Shih S.L., Green S.K., Akkermans D.; RT ; RL Submitted (22-SEP-1999) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX RN [3] RC Sequence update by submitter RP 1-2762 RA Shih S.L., Green S.K., Akkermans D.; RT ; RL Submitted (02-JUN-2005) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; a7683b8b27a0ce1d1e8dffb6378d91f2. DR EuropePMC; PMC5450371; 28558726. XX CC On Jul 24, 2006 this sequence version replaced gi:66865872. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Tomato yellow leaf curl Indonesia FT virus-[Lembang]" FT /segment="A" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Indonesia:Lembang" FT /collection_date="Jan-1998" FT /db_xref="taxon:395349" FT gene 167..517 FT /gene="V2" FT CDS 167..517 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /db_xref="GOA:Q9QD51" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9QD51" FT /protein_id="AAF01054.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAIKYLQGVEATYAPDTVGYDLVRDL FT ISVVRASNYAEACRRYSLFRSRIESTPSSQLRQPRYQPCCCTHCPRHKSKEVLDFSAYV FT PEAQDLPDVPNS" FT gene 327..1100 FT /gene="V1" FT CDS 327..1100 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q9QD50" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9QD50" FT /protein_id="AAF01055.4" FT /translation="MLKRAGDIAFSGPVSKVRRRLNYDSPGTSRAAVLTALGINRKKSW FT TSRPMYRKPRIYRMYRTADVPRGCEGPCKIQSFESRHDIAHTGKVMCVTDVTRGGGLTH FT RTGKRFCVKSLYILGKIWMDENIKTKNHTNTVMFYVVRDRRPYGTPQDFGQVFNMFDNE FT PSTATVKNDLRDRFQVLRKFTATVVGGQYACKEQTLVRKFMRLNNYVVYNHQETAKYEN FT HTENALLLYMASTHASNPVYATLKIRIYFYDSITN" FT gene complement(1097..1501) FT /gene="C3" FT CDS complement(1097..1501) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q0WX67" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q0WX67" FT /protein_id="ABG79570.1" FT /translation="MDLRTGEYITAAQARNGVYIWEIQNPLYFKILSHHSRPFNTNHDV FT ITIRLQFNHNLRKALGIHRCFLTFQVWTYLHPPTGLFLKVFKTQCIKYLNNLGVISINN FT VIRAVDHVLFKVLERTIDVQPDYEIKFNIY" FT gene complement(1242..1649) FT /gene="C2" FT CDS complement(1242..1649) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q0WX66" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q0WX66" FT /protein_id="ABG79571.1" FT /translation="MQNSSPSRDHCTQVPIKVQHRIAKKKIIRRRRVDLNCGCSYYVSI FT NCANHGFTHRGVHHCSSSQEWRLYLGDSKSPLFQDTQPSQPAVQHEPRRDNNTAAVQPQ FT PEESVGNTPVFSDVPSLDLLTPSDWAFLKSL" FT gene complement(1579..2667) FT /gene="C1" FT CDS complement(1579..2667) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q0WX65" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q0WX65" FT /protein_id="ABG79572.1" FT /translation="MESNRGTPSNNSLTKRFQINAKNYFLTYPHCSLSKSEALSQIRNL FT NTPTNKKYIKICSELHEDGEPHLHVLIQFEGKFKTKNKRFFDLVSPTRSTHFHPNIQGA FT KSSSDVKAYIEKDGDTLEWGTFQIDGRSSRGGKQSANDAYAKAMNAGNKAEALNILKEL FT APKDYILQFHNLNTNLDKIFMTPQPVFTSPFLSSSFDQVPEELEEWVAENIVDPAARPL FT RPKSLVLQGDSRTGKTMWARSLGRHNYLCGHLDLNPRVYSNDAWYNVIDDVDPHYLKHF FT KEFMGAQMDWQSNTKYGRPIQIKGGIPTIFLCNAGPTSSYKEFLDEPKNIALKNWSLHN FT AEFITLERPLYSGSHQSPAPDC" FT gene complement(2283..2480) FT /gene="C4" FT CDS complement(2283..2480) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q0WX64" FT /protein_id="ABG79573.1" FT /translation="MGNHISMCLSNLRVSSRQRTRGSSIWYPQPDQHISIRTFRELNQA FT PMSKHISKRMVIPLNGVPSK" XX SQ Sequence 2762 BP; 709 A; 561 C; 639 G; 853 T; 0 other; acctacaggc cgccggggcc cggggtcact atggtccccc cccactttag ctgcttttgc 60 ttttgcttta atgtggtccc gtaataaatg agagagcgcg atgagcgctt agttgatttg 120 tggtccttct ataaaacgtg ctgggcacgg agaaagctga atagccatgt gggatcctct 180 tttaaacgaa tttccggatt ctgttcacgg ttttcggtgt atgctcgcaa taaagtattt 240 gcaaggcgtt gaagcaacct acgcccctga tactgtcggt tacgacctag ttcgagatct 300 gatctcagtt gttcgtgcga gcaattatgc tgaagcgtgc cggagatata gccttttccg 360 gtcccgtatc gaaagtacgc cgtcgtctca attacgacag cccaggtacc agccgtgctg 420 ctgtactcac tgccctcggc ataaatcgaa agaagtcttg gacttctcgg cctatgtacc 480 ggaagcccag gatttaccgg atgtaccgaa cagctgatgt ccctagggga tgtgaaggtc 540 cttgcaagat tcaatccttt gaatctcgac atgatattgc tcacaccggt aaggttatgt 600 gtgtgacgga tgttactcgt ggcggtggtt taacccaccg tactgggaag agattttgcg 660 ttaagtccct ctatatcctt ggcaaaatct ggatggatga aaatatcaag actaagaatc 720 acactaacac ggtcatgttc tatgttgttc gggatcgtag accctatggt actcctcaag 780 attttggaca agtgtttaac atgttcgata acgaacctag cactgcaact gtcaagaatg 840 atcttcgaga tcggtttcaa gttttgcgga agttcacggc aactgttgtt ggtggtcagt 900 atgcttgtaa ggaacaaacg ttagttagga agttcatgag attgaacaat tatgttgttt 960 acaaccatca ggaaaccgca aaatatgaga atcatacaga gaatgctctg ttattgtaca 1020 tggcatctac gcatgcctct aaccctgtgt atgcaacttt gaaaattcgg atctattttt 1080 atgattcgat aacaaattaa taaatgttga attttatttc ataatctggt tgtacatcaa 1140 tagtgcgttc tagcacttta aacaagacat ggtctacagc tctaattaca ttattaattg 1200 aaattacacc taaattattc aagtatttaa tacattgagt cttaaagact tttaagaaaa 1260 gcccagtcgg agggtgtaag taagtccaaa cttggaacgt cagaaaacac cggtgtattc 1320 ccaacgcttt cctcaggttg tggttgaact gcagccgtat tgttatcacg tcgtggttcg 1380 tgttgaacgg ccggctgtga tggctgagta tcttgaaata gaggggattt tgaatctccc 1440 aaatatagac gccattcctg gcttgagctg cagtgatgta ctcccctgtg cgtaaatcca 1500 tgattagcac agtttattga cacgtagtat gagcaaccgc aattaaggtc tacccgccgt 1560 cgtcttatta tcttcttttt agcaatccgg tgctggactt tgatgggaac ctgagtacag 1620 tggtctctcg agggtgatga attctgcatt atgaagagac caatttttaa gtgcgatgtt 1680 tttaggttcg tctaaaaact ctttatatga agatgtgggt ccagcattac ataaaaagat 1740 ggtcggtatc ccgcctttaa tttgaatggg tctaccatac tttgtattgc tttgccagtc 1800 catctgggcc cccataaact ctttaaagtg ctttaggtaa tgcggatcga cgtcatcaat 1860 gacgttatac catgcgtcat ttgagtaaac cctaggattg agatctagat ggccgcacaa 1920 gtaattgtgc ctaccaagcg atctagccca catggtttta cctgtacgac tatcaccttg 1980 taacaccaga ctctttggtc ttaatggccg cgcagcgggg tcgactatgt tctcggcgac 2040 ccattcttca agttcttcag gaacctggtc aaaggatgaa gataagaatg gagaggtaaa 2100 gactggttgc ggagtcatga agatcttgtc aagatttgtg ttcaagttat gaaactgcaa 2160 gatgtaatct ttaggcgcaa gttctttaag aatattcaga gcctccgctt tgtttcctgc 2220 attcatagct tttgcataag cgtcgttagc ggattgcttt ccgcctcttg aagatcttcc 2280 atctatttgg aaggtacccc attcaagggt atcaccatcc ttttcgatat atgctttgac 2340 atcggagctt gatttagctc cctgaatgtt cggatggaaa tgtgttgatc tggttgggga 2400 taccagatcg aagaacctct tgttctttgt cttgaactta ccctcaaatt ggataagcac 2460 atggagatgt ggttccccat cctcgtgaag ctctgagcag attttgatat attttttatt 2520 tgttggggta ttcaaatttc taatttgaga gagagcttcg cttttagaga gagagcagtg 2580 aggataggtg aggaaatagt ttttagcgtt tatttgaaaa cgctttgtga gagagttatt 2640 agagggggtt ccccgattgc tctccattcc atctatcgta tgtatattgg ggaacgggga 2700 cctataaata cttctgtccc caataggttt tgtgcttacg tggcggcctg tagtataata 2760 tt 2762 //