ID   AF434911; SV 1; linear; genomic RNA; STD; VRL; 717 BP.
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AC   AF434911;
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DT   06-DEC-2001 (Rel. 70, Created)
DT   06-DEC-2001 (Rel. 70, Last updated, Version 1)
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DE   Citrus variegation virus 81A65 12 RNA3 capsid gene, complete cds.
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KW   .
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OS   Citrus variegation virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
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RN   [1]
RP   1-717
RA   Bennani B., Mendes C., Zemzami M., Azeddoug H., Nolasco G.;
RT   "Citrus variegation virus: molecular variability of a portion of the RNA3
RT   containing the coat protein gene and design of primers for RT-PCR
RT   detection";
RL   Unpublished.
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RN   [2]
RP   1-717
RA   Bennani B., Nolasco G.;
RT   ;
RL   Submitted (17-OCT-2001) to the INSDC.
RL   FERN, Universidade do Algarve, Campus de Gambelas, Faro 8000-117, Portugal
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DR   MD5; 920a1c2790b9eeb4ade33387e7d469a6.
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FH   Key             Location/Qualifiers
FH
FT   source          1..717
FT                   /organism="Citrus variegation virus"
FT                   /isolate="81A65"
FT                   /mol_type="genomic RNA"
FT                   /country="France: Corsica"
FT                   /clone="12"
FT                   /note="crinkly leaf"
FT                   /db_xref="taxon:37127"
FT   CDS             64..717
FT                   /codon_start=1
FT                   /product="RNA3 capsid"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q8V331"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V331"
FT                   /protein_id="AAL37950.1"
FT                   /translation="MSGNAIEINGRWYQPVPNNAPTRGRGGRRQPTARSRQWAQGLANV
FT                   RRSQPQQLLVGSVPTNLPTWRSFPGEQWHEVSGYSFPDRWGSGTIAYMTLRSELSKIRT
FT                   LHDTTKVYSVMIGFVCKSDGYAGFIDGFDANNATGPVAPDRIRVKRGKYCAKQQIFPTG
FT                   TTVSEVKANWSLVWDFDTAPATGAVHEISITKFYVSTTPLPGVKPPSNFLVVEE"
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SQ   Sequence 717 BP; 177 A; 169 C; 176 G; 195 T; 0 other;
     ggaggagatt tgtcttgaag tctccttctc cacttttacg tccctttctc ccacaacaac        60
     aaaatgtctg gtaatgctat tgaaatcaat ggtcgctggt atcaaccggt acccaataat       120
     gccccgactc gaggtcgtgg aggtcgccgc cagcccactg ctcgttctag acaatgggct       180
     cagggactgg cgaatgttcg acgatcgcaa ccacaacagt tgttggtcgg ttccgtgcct       240
     actaacttac caacttggag gtcattccca ggtgagcaat ggcatgaagt ttctgggtac       300
     agtttccctg atagatgggg ttctggtacc attgcttaca tgaccctacg ttcggagcta       360
     agtaagataa ggacgctcca tgataccacc aaggtgtatt cggtgatgat agggttcgta       420
     tgcaaatccg atggatatgc cgggtttata gatggtttcg atgctaacaa tgccactgga       480
     cctgtcgctc ctgataggat ccgtgtgaag aggggaaaat attgcgctaa acagcaaatt       540
     ttccctaccg gaaccacagt ttctgaagtg aaggccaatt ggagtttggt ctgggacttc       600
     gataccgccc cagcaactgg tgccgtgcat gaaatttcta taacgaaatt ttatgtttcc       660
     actacacccc ttcctggtgt gaagccacca agtaatttct tggttgttga agaatga          717
//