ID AF448058; SV 2; circular; genomic DNA; STD; VRL; 2740 BP. XX AC AF448058; XX DT 16-JAN-2002 (Rel. 70, Created) DT 26-JAN-2007 (Rel. 90, Last updated, Version 6) XX DE Tomato leaf curl New Delhi virus - [PkT5/6] segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl New Delhi virus - [PkT5/6] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RX AGRICOLA; IND44790013. RA Shih S.L., Tsai W.S., Green S.K., Khalid S., Ahmad I., Rezaian M.A., RA Smith J.; RT "Molecular Characterization of Tomato and Chili Leaf Curl Begomoviruses RT from Pakistan"; RL Plant Dis. 87(2):200-200(2003). XX RN [2] RP 1-2740 RA Shih S.L., Khalid S., Green S.K.; RT ; RL Submitted (15-NOV-2001) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX RN [3] RC Sequence update by submitter RP 1-2740 RA Shih S.L., Khalid S., Green S.K.; RT ; RL Submitted (23-MAY-2002) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 0eae9d3060d24f73f772b2324c4dd8fd. DR EuropePMC; PMC2170441; 17963488. DR EuropePMC; PMC5622471; 28964254. XX CC On Dec 2, 2002 this sequence version replaced gi:18139958. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl New Delhi virus - [PkT5/6]" FT /segment="DNA-A" FT /host="tomato plant with leaf curl symptoms" FT /mol_type="genomic DNA" FT /country="Pakistan:Dargai, North West Frontier Province" FT /clone="PakT5-6" FT /note="isolated in 2001" FT /db_xref="taxon:270144" FT gene 41..427 FT /gene="AV3" FT CDS 41..427 FT /codon_start=1 FT /gene="AV3" FT /product="AV3 protein" FT /db_xref="UniProtKB/TrEMBL:Q8V2B1" FT /protein_id="AAL60211.1" FT /translation="MKFTLHGLFSAGGPINRLAHQVWIHKYVGSIVARISRKRSWSEVH FT ASCKISPRDRKELFPRHSRIRSCPRSHSCSSRKELCRSDQQISSFQRPHRKYADVSTST FT APMELVQLSPLPASQKQRPGPTGR" FT gene 120..458 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q8V2B0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8V2B0" FT /protein_id="AAL60212.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYVEATSRYHHFNARIESTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q8V2A9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8V2A9" FT /protein_id="AAL60213.2" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(310..795) FT /gene="AC5" FT CDS complement(310..795) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q8B5T5" FT /protein_id="AAN76345.1" FT /translation="MHVLHRCCARFIIKHVKNFPKILGGSCRTTVTDQKEHDTVSMVFC FT LDVFIHPYLSKHIDRFHTKSLPYAMCESSSSGNITNAHDFANMRYIVPGFKGLHLTRAF FT TAPWHVGTSIHSVHSGFSVHRPVGPGLCFCDAGNGDNCTSSIGAVEVETSAYFRCGR" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q8B5T4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8B5T4" FT /protein_id="AAN76346.1" FT /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILQHHSRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGV FT YNVIRAVYHVLDNVLERTIDVWATYDIKLDIY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q8B5T3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8B5T3" FT /protein_id="AAN76347.1" FT /translation="MQSSSHSKNHSIQVAKTSLPQKKKKSIRRRRVDLPCGCSYYISIN FT CHDHGFTHRGIHHCGSSREWRIYLGNSKSPVFQNFATPQQALPNTARHHQDSNTIQPQP FT AESPRTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q8V2B2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8V2B2" FT /protein_id="AAL60210.2" FT /translation="MAPPRRFRINAKNYFLTYPKCSLTKEEALSQLQTLETPTAKKFIK FT ISRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKADALKLLKELAPKDYVLQFH FT NLNSNLDRIFQPPSEVYVSPFLISSFDRVPPELVDWVSSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPPEEEEEHSQEAS" FT gene complement(2251..2427) FT /gene="AC4" FT CDS complement(2251..2427) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8B5T2" FT /protein_id="AAN76348.1" FT /translation="MGLRISMCSSNSKENSSAKITDSSTWFPQVGQHISIRIFRELNQH FT RTSKHTSTKTETF" XX SQ Sequence 2740 BP; 744 A; 582 C; 621 G; 793 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcgacca atgaaattca cgctacatgg 60 cttatttagt gcggggggac caataaatag acttgctcac caagtttgga tccacaaata 120 tgtgggatcc attgttgcac gaatttccag aaagcgttca tggtctgagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc agacacagtc ggatacgatc 240 ttgtccgaga tctcattctt gttcttcgcg caaagaacta tgtcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaagta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgtaaggt gcagtccttt gaatccaggc acgatgtatc tcatattggc 540 aaagtcatgt gcgttagtga tgttacccga ggaactggac tcacacatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatgtgctt ggaaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttc tttttggtcc gtgaccgtcg tcctacagga 720 tccccccagg attttgggga agtttttaac atgtttgata atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctaa ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggccggg aagtatgaga atcatactga aaacgcatta 960 atgttgtata tggcctgtac gcacgcatca aatcctgtgt atgctacttt gaaaatccgg 1020 atctattttt atgattcggt cacaaattaa taaatatcga gctttatatc atatgttgcc 1080 catacatcaa ttgttcgctc caatacatta tccaatacat gataaactgc tcttattaca 1140 ttataaactc ctattacacc gagcatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ctagggcttt ccgcaggttg tggttgaatt gtatttgaat cttgatgatg 1320 tcgtgctgtg ttaggaaggg cctgctgtgg tgttgcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatataatac gaacaaccac acggcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctggggg agcgatgttt tcgcgacctg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ttcttcgtcc agatattctt tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgaccggctt tccgtatttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtggggt cctaaacatc gagcccacat tgttttgccc gttctactat 1920 ccccctcaat gactatgctt atgggcctaa aaggccgcgc agcggcacac accacattgg 1980 acgagaccca atcgacgagt tctggcggaa ctctgtcgaa ggatgaaatt aaaaatggag 2040 aaacataaac ctcagaagga ggttgaaaaa tgcgatctaa attgctattt aaattgtgaa 2100 actgcagaac ataatccttt ggggctaatt cctttaataa tttcaacgca tcggctttat 2160 ttcccgtgtt aattgcctga gcatatgcat cgttcgccgt ttgttgacca ccacgcgcag 2220 atcgtccatc gatctggaaa acgccccatt ctagaacgtc tccgtctttg tcgatgtatg 2280 ctttgacgtc cgatgctgat ttagctccct gaatattcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gaattttcct tcgaattgga 2400 tgagcacatg gatatgcgga gacccatcct cgtgaagctc tctgctgatc ttgatgaatt 2460 tcttcgcagt tggggtttct agggtttgca attgggaaag tgcctcttct ttagttagag 2520 agcactttgg atatgtgagg aaatagtttt ttgcattaat tctaaaacga cgtggcggag 2580 ccataaaact tgtcgttttg attcggagtc tctcaacttg ctctatgtaa ttggtgtctg 2640 gggtcctata tataggtaag acaccaaatg gcagaattgt aattttgaaa agaaaattac 2700 tttaattcaa agtcactaaa gcggccattc gtataatatt 2740 //