ID AF534641; SV 1; linear; genomic RNA; STD; VRL; 2572 BP. XX AC AF534641; XX DT 10-SEP-2002 (Rel. 73, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Gremmeniella abietina mitochondrial RNA virus S1 putative RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Gremmeniella mitovirus S1 OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2572 RX DOI; 10.1007/s00705-003-0195-5. RX PUBMED; 14648296. RA Tuomivirta T.T., Hantula J.; RT "Gremmeniella abietina mitochondrial RNA virus S1 is phylogenetically RT related to the members of the genus Mitovirus"; RL Arch. Virol. 148(12):2429-2436(2003). XX RN [2] RP 1-2572 RA Tuomivirta T.T., Hantula J.; RT ; RL Submitted (05-AUG-2002) to the INSDC. RL Vantaa Research Centre, Finnish Forest Research Institute, Jokiniemenkuja 1 RL P.O. Box 18, Vantaa 01301, Finland XX DR MD5; b859d95e19a7df7be1ffe24312268134. XX CC Name: Gremmeniella abietina mitochondrial RNA virus S1 putative CC replicase gene, complete cds. XX FH Key Location/Qualifiers FH FT source 1..2572 FT /organism="Gremmeniella mitovirus S1" FT /host="Gremmeniella abietina type A" FT /isolate="Luu7" FT /serotype="type A, LTT" FT /mol_type="genomic RNA" FT /db_xref="taxon:204819" FT CDS 254..2479 FT /codon_start=1 FT /transl_table=4 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:Q8BCI2" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q8BCI2" FT /protein_id="AAN05635.1" FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFKCLTKHLKHHGIVST FT VKIFKQIRLHVTRYLCGSPLRINSMMIGIDKDGWPKMINFLKPLANGTRSDKQLLLSIL FT FITRSFVEKDKSKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVDYLTKIMNWTWLKDLGNKK FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQN FT PLNDWEDNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPEIANSWQNLLVHREYARNG FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCNINKFKDYIILGDDIVIHNDNIA FT KKYIEIMGKLGVGLSNSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM FT NLYDFFKIKRNQYNFSGDILTMLLKLYQGLKIYKGDKSKKHYYLSLNRFKNLDIFLFAL FT NNTFGYSTYDHKRSFLISKDYSKDLPGPKIMQDLISYVISTGLSNLTVESVNKSLKFVD FT TIIDNKNLLNIEDPNDLSNLPLFKGFQAYISNLRKTVEGWNNKSISLIEASRGLVQMDI FT LPIMKGSNRKILELQTIGKIYQNGIQEINNSEFEIFGSSQMIHPNESLGIQEGSSLNSF FT SSLSSSIDTNLVFIQNELNVIAKKNWMPPATEDSVADSYAAFAAMFN" XX SQ Sequence 2572 BP; 940 A; 393 C; 395 G; 844 T; 0 other; ggtgtttaca ccttaaataa gtgtaaacag ggctaatcac ccggccaagt attattttct 60 tggtcccagt tagcaatact atgagagtat tctagatttc ttcgagtgtc ccttttggtt 120 aatttctgaa ggctggaaac tccaaccgtt ggaaataccc tgcaaaagag ctaggttata 180 gcatcgtaga taactataat tgctcttggg ccgcaagtcg gctatgcggt acaaccgtta 240 agacttaatt attatgaaca aaaatttatt tcaaatagta attaaactat tcgtaatgat 300 atttttgaac actgatgtta agctcttcgt atctctttat tttaaatgtt taacaaaaca 360 tttaaaacac cacggaatag tgagtactgt aaaaatattt aaacaaataa gattacatgt 420 gactcgctat ctttgtggat caccattgag aataaactca atgatgatag ggatagataa 480 agatggttga ccaaaaatga tcaatttcct aaaacctctt gccaatggta cgagatctga 540 taaacaatta cttttatcaa tcttgttcat tacgagaagt tttgtggaaa aagacaagag 600 taaactagtt cctgattgaa gtacaataac acaaccccga acaactcaaa aggaatatat 660 tatcccttct ggatttatta aggattgagt attgaacaat catttaggta cttataaaag 720 tgaatttgat gattctaatc attttgtttc agtgaagagt agtcctactg gaccatcaac 780 actgacagca ttatgaggac tatgaaatca tagttacgaa tcatttaatt gactttttaa 840 gattactagt ttatctggtg ttgattatct tacaaaaatc atgaattgga cttgattaaa 900 agacctagga aataaaaaga ataataaatg atccaaacaa tttttaggat ctttatcatt 960 aatttatgac ccagaatgta aagttaggat agtagctatg ttagattata caacacagct 1020 atttctccga cctatacata atgacttgtt taaacttctt aagaagttac cacaagatag 1080 gacttttact caaaatcctt taaatgattg agaagataat gaacactcat tttgatcaat 1140 cgaccttacg gctgcaactg atagatttcc aataagttta cagcgtcggt tattactata 1200 tatctatagt gatcccgaaa ttgcaaattc ttgacaaaat ctattagtac atagagaata 1260 tgctcgtaat gggctgaatc caataaaata ttctgttgga cagcccatgg gagcatattc 1320 atcctgacct gctttcacat tatctcatca tcttgtagtt cattgatgtg cacatttgtg 1380 taacattaat aaatttaaag attatataat tcttggtgat gatatcgtta tacataatga 1440 taacattgca aagaagtata ttgagataat gggaaagtta ggagtgggtc tatctaatag 1500 taaaactcat gtatctaaag atacttatga atttgctaaa agatgaatcc ataaaggaca 1560 agaaatatcg ccattaccta ttacaggaat tgttaataat ataacaaatc cctatatagt 1620 gttaatgaat ttatacgatt tctttaaaat caaaagaaac cagtataact tctcaggtga 1680 tatactaact atgttattaa aattatacca aggtttaaaa atttacaaag gagataaaag 1740 taaaaaacat tattacttat ctcttaatag atttaaaaat cttgatatat ttttatttgc 1800 gctgaataat accttcggat actcaacata tgatcataaa agatcatttt tgatttccaa 1860 agattacagt aaggatttac caggaccaaa aataatgcaa gatttaatat cttacgtaat 1920 tagtactggt ttatctaatc ttactgtgga aagtgtaaat aaatcactta agttcgttga 1980 tactataata gataataaaa atctattaaa tatcgaagat cctaatgatt tatctaacct 2040 tccattattc aaaggttttc aagcttatat ctctaatctt cgaaaaactg tcgaggggtg 2100 aaataataaa tcaatttcac ttatcgaagc ttctagagga ttagtccaga tggatatact 2160 tccaattatg aaaggttcta ataggaaaat tttagaactt caaacaattg gaaaaatata 2220 ccaaaatgga atacaagaaa taaataatag tgaatttgaa atttttggtt cctcccaaat 2280 gatacaccca aacgaaagtt taggtattca agaaggaagt tccttaaatt cattttcatc 2340 attatcatct agtatagata ctaacttggt ttttatccag aatgagttaa atgttatagc 2400 taagaagaac tgaatgcctc ctgcaactga agattcagtt gcggattcat atgcagcctt 2460 cgcagctatg ttcaattaat atcattaccg aatacagttg caaatctaga tactcaaaaa 2520 ctatattgag tctagactcc aactggggtt ttacacatat gtgtaaaaca cc 2572 //