ID AJ535914; SV 1; linear; genomic RNA; STD; VRL; 3062 BP. XX AC AJ535914; XX DT 02-JAN-2003 (Rel. 74, Created) DT 03-JAN-2003 (Rel. 74, Last updated, Version 2) XX DE Cucumber mosaic virus strain Ly2 genomic segment for 2a and 2b proteins, DE genomic RNA XX KW 2a gene; 2a protein; 2b gene; 2b protein. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3062 RA Jung H.J.; RT ; RL Submitted (27-DEC-2002) to the INSDC. RL Jung H.J., Division of Biological Environmant, Kangwon National University, RL chuncheon, Kangwondo, 200-701, SOUTH KOREA. XX RN [2] RA Jung H.J., Choi J.K.; RT "Determination of complete nucleotide sequence and construction of RT full-length cDNA clones of Ly2-CMV RNA1, 2 and 3."; RL Unpublished. XX DR MD5; 05a6170046a6231cce87b75bbc317a0a. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3062 FT /organism="Cucumber mosaic virus" FT /host="Lilium longiflorum" FT /strain="Ly2" FT /mol_type="genomic RNA" FT /country="South Korea:Youngwol" FT /db_xref="taxon:12305" FT CDS 85..2658 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:Q8B3M4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8B3M4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD59795.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRFGQLWCPAFNKCTFISSIAMARVLLLAPRTSDRTMKCFEDLVAAIYTKSDFYYDEEC FT EADDVQTDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCRYEKCPTPTIATPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKFPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLYAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCTSEFRIERVNSTKQRKKYGIERGRNDKRRTPTGSYSGGEETETKVSQAESTR FT TRSQKSQRESAFKSQTVPLPTILSSRWFGTDRVVPPYERGGVTRA" FT CDS 2417..2749 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q8B3M3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD59796.1" FT /translation="MELNAGAMTNVELQLARIVEAKRQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFFQVDGSELTGSCRHMNVAELPEPEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3062 BP; 767 A; 700 C; 710 G; 885 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagacttt 60 aaatctcttt ctagtatctt tctcatggct ttccccgccc ccgctttctc actagccaat 120 cttttgaacg gcagttacgg tgtcgacact cccgaggaag tggaacgttt gcgatctgag 180 caacgtgaag aggctgctgc ggcctgtcgt aactacaggc ccctacccgc tgtggatgtc 240 agcgagagtg tcacagagga tgcgcattcc ctccgaactc ctgacggagc tcccgctgaa 300 gcggtgtcag atgagtttgt tacttatggt gctgaagatt accttgaaaa atctgatgat 360 gagctccttg tcgcttttga gacgatggtc aaacccatgc gcttcggaca actatggtgc 420 cccgcgttta ataaatgtac ttttatttcc agcattgcta tggccagagt tttgctgctg 480 gcacctagaa catccgaccg aaccatgaag tgttttgaag acctagtcgc ggctatttac 540 actaaatccg acttctatta cgatgaagag tgtgaagccg acgacgttca gacagatatc 600 tcgtctcgcg atgtacccgg ctattctttc gagccgtggt cccgaacgtc tggattcgaa 660 ccgccgccta tttgtgaggc gtgcgacatg atcatgtacc agtgcccgtg ttttgatttc 720 aatgctttga agaaatcgtg cgctgagagg actttcgctg atgattatgt tattgaagga 780 ttagatggtg ttgttgacaa tgcgactctg ttgtctaatt tgggtccatt tttggtaccc 840 gtgaaatgtc gatatgaaaa atgtccaaca ccgaccatcg cgactcctcc ggatttaaat 900 cgtgctactg atcgtgttga tattaatctg gttcaatcca tttgtgactc gactctgccc 960 actcacagta attacgacga ctcttttcat caggtgttcg tcgaaagcgc agattactct 1020 atagatctgg atcatgttag acttcgacag tctgatctca ttgcaaaatt tccagattca 1080 gggcatatga taccggttct gaataccggg agcggtcaca agagagtagg tacaacgaag 1140 gaggtcctta cagcaattaa gaaacgtaat gctgacgttc cagagctagg tgattccgtt 1200 aatctgtcta gattgagtaa agctgtggct gagaggtttt tcatttcgta catcaatggt 1260 aactctctag catccagtaa tttcgttaat gtcgttagta atttccacga ttacatggaa 1320 aagtggaagt cttcaggtct ctcttatgat gatctcccag atcttcatgc tgagaatttg 1380 cagttttatg atcacatgat aaaatctgat gtgaaacctg ttgttagcga cacgctcaat 1440 atcgacagac cggttccagc tactataacg taccataaga agagtataac ctcccagttc 1500 tcaccattat tcacagcgct atttgagcgc ttccagagat gccttcgaga acgtattatt 1560 cttcctgttg gtaagatttc atctcttgag atggcggggt tcgatgttaa aaacaagcac 1620 tgtctcgaga ttgacttgtc taaatttgat aagtctcaag gtgaattcca tctgctaatt 1680 caggaacaca ttttgaatgg tctaggttgc ccagctccga taaccaagtg gtggtgtgat 1740 ttccaccgat tctcttacat tagagatcgt agagctggtg ttggtatgcc tattagtttc 1800 cagagacgaa ccggtgatgc gttcacttac tttggcaata ccatcgtcac catggctgag 1860 ttcgcctggt gttatgacac cgaccaattc gaaaagcttt tattctcagg cgatgattct 1920 ctgggatttt cattgcttcc ccctgttggt gatccgagta aattcacaac tcttttcaac 1980 atggaagcta aggtgatgga acctgccgta ccatatatct gttcgaagtt cttactctct 2040 gacgagttcg gtaatacatt ttccgttcca gatccattgc gcgaggttca gcggttagga 2100 acaaagaaaa ttccctattc tgacaatgat gaattcttgt atgctcactt catgagcttt 2160 gttgatcgat tgaagttttt ggaccgaatg tctcagtcgt gcatcgatca actttcgatt 2220 ttcttcgaat tgaaatacaa gaagtctggg gaagaggctg ccttaatgtt aggcgccttt 2280 aagaaatata ccgctaattt tcagtcctac aaagaactct actattcaga tcgtcgtcaa 2340 tgcgaattga tcaattcgtt ttgtacttca gagtttagga ttgagcgtgt aaattccacc 2400 aaacagcgaa agaaatatgg aattgaacgc gggcgcaatg acaaacgtcg aactccaact 2460 ggctcgtata gtggaggcga agagacagag acgaaggtct cacaagcaga atcgacgaga 2520 acgaggtcac aaaagtccca gcgagagagc gcgttcaaat ctcagactgt tccgcttcct 2580 accattcttt caagtagatg gttcggaact gacagggtcg tgccgccata tgaacgtggc 2640 ggagttaccc gagcctgagg cctctcgttt agagttatcg gcggaagacc atgattttga 2700 cgatacagat tggttcgccg gtaatgaatg ggcggaagga gccttctgaa cctccccttc 2760 cgcacctccc tccagttttc atggcgggag ctgagttggc agtattgctc taaactgtct 2820 gaagtcacta aacacagtgt gtcactgtac acattgtggt gaacgggttg tccatccagc 2880 ttacggctaa aatggtcagt cgtggagaaa tccacgccag tagacttaca agtctctgag 2940 gcacccttga aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc 3000 acaatgtgcc agtttagggt acgggtgtcc cccgctttcg tggggcctcc ataaggagac 3060 ca 3062 //